Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023872.1 Corchorus olitorius cultivar O-4 contig23905, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9871

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--6822
332
20.7
332
85
4
8137
34
14
15
36
1.88
6580--7072
250
2.0
244
87
4
704
35
13
15
35
1.87
6824--7688
324
2.6
325
85
5
1191
35
14
15
34
1.88
5914--8650
907
3.0
905
88
3
3955
34
14
15
35
1.87
7482--7979
249
2.0
248
89
1
757
34
13
15
36
1.87
7728--9871
336
6.4
334
89
2
2857
33
14
15
35
1.88

Tables:   1

The End!