Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024054.1 Corchorus olitorius cultivar O-4 contig24087, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9987

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1236--1332
40
2.4
41
79
5
99
23
14
15
46
1.83
3333--3423
40
2.2
41
82
5
105
23
14
16
46
1.83
4751--4848
41
2.4
41
81
8
103
23
15
13
47
1.80
1844--5552
705
5.2
705
91
1
5801
29
15
22
32
1.95
6100--6133
17
1.9
18
94
5
61
76
0
17
5
0.98
6107--6150
18
2.3
19
80
15
54
75
4
15
4
1.14

Tables:   1

The End!