Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024124.1 Corchorus olitorius cultivar O-4 contig24157, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23411

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3907--3968
28
2.3
26
84
13
81
16
8
30
45
1.76
5480--6230
47
16.2
46
84
7
862
29
19
5
45
1.72
5480--6230
94
8.1
94
85
5
992
29
19
5
45
1.72
14505--14543
18
2.2
18
90
0
60
20
23
20
35
1.96
17182--17225
12
3.7
12
90
0
70
56
27
11
4
1.53
20422--20660
39
5.9
38
81
11
264
37
16
15
31
1.89

Tables:   1

The End!