Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024157.1 Corchorus olitorius cultivar O-4 contig24190, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1073

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63--196
18
7.3
18
81
10
148
26
16
2
54
1.54
70--212
54
2.6
54
92
4
225
24
17
2
55
1.55
62--224
54
2.9
55
87
8
224
25
16
2
55
1.54
213--297
27
3.5
26
72
24
94
29
21
0
49
1.50
240--504
19
12.6
19
65
25
92
27
17
1
54
1.50
210--410
46
4.6
45
78
14
217
26
18
0
54
1.47
240--392
84
1.9
81
89
5
236
26
16
0
56
1.45
319--364
20
2.2
22
84
7
69
23
17
0
58
1.38
240--613
83
4.6
80
70
20
242
26
17
1
54
1.51
157--406
130
2.0
127
84
4
333
25
17
1
55
1.49
339--439
43
2.4
44
81
6
118
25
18
0
54
1.50
240--605
188
1.9
193
85
8
512
26
17
1
54
1.51
305--513
105
2.0
108
90
3
336
25
16
1
55
1.49
427--614
46
4.1
46
93
2
315
26
17
1
54
1.52
471--596
27
5.8
20
66
27
69
28
17
1
52
1.54
520--553
18
1.9
17
88
5
50
29
11
2
55
1.50
473--508
19
2.0
18
89
10
56
30
13
0
55
1.39
428--610
91
2.0
93
93
2
316
27
18
1
53
1.54

Tables:   1

The End!