Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024866.1 Corchorus olitorius cultivar O-4 contig24899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14504

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2440--2481
20
2.1
20
86
0
57
19
19
30
30
1.96
3807--5087
130
9.7
129
89
4
1674
38
13
26
22
1.91
3945--5087
64
17.6
64
89
4
1597
37
13
26
22
1.91
3807--5087
194
6.5
192
88
5
1637
38
13
26
22
1.91
13955--14027
29
2.5
30
84
2
85
19
20
17
42
1.89
14161--14202
21
2.0
22
90
4
68
50
0
2
47
1.14
14154--14209
21
2.6
20
83
13
67
53
1
3
41
1.29

Tables:   1

The End!