Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000827.1 Corchorus olitorius cultivar O-4 contig00827, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1437

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--73
8
4.9
8
83
0
51
46
5
28
20
1.72
26--73
24
2.0
24
87
0
69
47
6
25
20
1.73
119--311
56
3.4
57
88
2
282
42
8
22
26
1.81
279--1208
22
41.5
22
66
23
165
45
2
21
30
1.65
289--1208
14
64.6
14
68
23
358
45
2
21
30
1.65
289--1117
36
23.4
36
72
19
330
45
2
21
30
1.64
572--687
30
3.6
31
73
16
92
48
3
19
28
1.65
623--679
30
1.9
30
92
0
96
43
5
22
28
1.75
289--1184
8
122.0
7
64
24
160
45
2
21
30
1.64

Tables:   1

The End!