Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009685.1 Corchorus olitorius cultivar O-4 contig09717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5571

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--3841
333
11.6
328
81
6
3876
35
17
14
32
1.90
225--3811
996
3.6
995
86
4
4656
35
17
14
32
1.90
3741--3953
113
1.9
113
88
5
324
40
17
8
32
1.81
3854--4743
334
2.7
332
83
5
1078
37
16
12
33
1.86
4521--4983
251
1.8
250
83
5
569
36
16
11
36
1.84

Tables:   1

The End!