Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009961.1 Corchorus olitorius cultivar O-4 contig09993, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8990

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--3353
329
10.1
327
74
10
2508
32
14
16
36
1.89
22--3350
657
5.0
648
76
9
2629
32
14
16
36
1.89
34--7507
986
7.6
976
80
9
5104
32
14
16
36
1.89
3693--7527
656
5.9
648
75
11
2434
33
14
16
35
1.89
6728--6753
2
13.0
2
100
0
52
50
0
0
50
1.00
7388--7669
142
2.0
142
90
1
449
38
12
13
35
1.83
7561--8988
330
4.3
329
77
8
1385
32
14
17
35
1.90

Tables:   1

The End!