Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167955.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50203

Tables:   1   

This is table  1  of  1  ( 69 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1894--1945
26
2.0
26
88
7
79
28
23
17
30
1.97
2766--2818
26
2.0
26
92
7
90
26
26
18
28
1.98
3043--5139
717
2.9
717
93
1
3440
27
23
21
26
1.99
4462--11561
876
8.0
877
82
6
7879
26
24
23
26
2.00
8624--8673
26
2.0
24
88
7
73
30
28
12
30
1.92
9505--9557
26
2.0
26
88
0
79
28
26
16
28
1.97
7744--11561
886
4.3
897
83
6
4609
25
24
23
25
2.00
11292--11344
26
2.0
26
88
0
79
30
24
16
28
1.97
12036--12435
59
6.7
58
82
11
445
33
13
8
45
1.73
12097--12185
27
3.1
27
64
14
70
34
13
6
44
1.70
12036--12434
58
6.7
57
83
11
455
33
13
8
44
1.74
12036--12429
180
2.2
178
88
5
569
33
13
8
44
1.74
12451--12534
5
17.6
5
77
16
81
82
1
2
14
0.84
12446--12530
9
9.6
9
77
10
77
81
1
3
14
0.89
12446--12535
43
2.1
42
87
6
128
80
1
4
14
0.93
12549--12606
12
5.0
11
78
21
57
68
5
0
25
1.10
12560--12607
4
12.5
4
80
14
57
72
2
0
25
0.95
12563--12606
7
6.6
7
79
10
56
72
2
0
25
0.96
12549--12607
26
2.1
28
87
9
86
69
5
0
25
1.09
13646--13697
26
2.0
25
92
3
86
26
25
19
28
1.98
12618--15685
875
3.5
886
84
5
3906
24
24
25
25
2.00
15421--15473
26
2.0
26
96
0
97
28
26
18
26
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16162--16677
59
8.7
58
84
7
607
33
13
8
44
1.75
16162--16679
179
2.9
175
87
7
747
33
13
8
44
1.75
16162--16679
119
4.4
116
86
5
639
33
13
8
44
1.75
16694--16786
5
18.8
5
70
24
56
77
1
5
16
1.01
16693--16781
30
3.0
29
79
14
92
76
1
6
15
1.05
16694--16776
29
2.8
29
82
10
89
77
1
6
15
1.03
16689--16785
46
2.1
47
83
9
119
76
1
6
16
1.04
16696--16785
20
4.6
20
75
22
66
76
1
5
16
1.03
16817--16859
4
11.5
4
83
14
56
76
2
0
20
0.89
16816--16859
11
4.0
11
80
8
54
75
2
0
22
0.92
16817--16855
15
2.7
15
88
4
53
76
2
0
20
0.90
17645--17702
31
1.9
30
96
3
107
74
5
8
12
1.21
17684--17766
43
2.0
42
81
15
100
68
6
3
21
1.27
17742--17783
19
2.2
19
87
8
59
69
0
0
30
0.89
17906--17931
6
4.3
6
100
0
52
84
0
0
15
0.62
17897--17941
22
2.0
22
87
8
65
80
4
0
15
0.87
18097--18168
1
72.0
1
76
0
63
6
1
4
87
0.71
18091--18156
8
8.5
8
88
6
91
9
3
1
86
0.74
18091--18156
15
4.2
16
84
5
91
9
3
1
86
0.74
18097--18168
22
3.2
22
86
11
101
6
1
4
87
0.71
18176--18307
41
3.1
41
87
3
174
32
25
17
24
1.97
19335--19402
8
7.9
8
83
15
75
13
14
0
72
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19335--19400
27
2.5
27
87
7
91
12
13
0
74
1.08
19335--19402
18
3.9
17
82
16
77
13
14
0
72
1.13
22876--22925
19
2.6
19
76
17
50
32
0
2
66
1.03
22944--23032
39
2.3
39
86
7
119
13
5
4
76
1.12
23904--23980
10
7.6
10
77
20
63
18
1
1
79
0.88
23905--23979
23
3.4
22
82
10
91
17
1
1
80
0.86
23928--24011
37
2.2
37
81
6
98
16
4
2
76
1.07
24033--24427
60
6.6
59
83
9
489
42
9
14
33
1.77
24033--24427
120
3.3
118
89
7
595
42
9
14
33
1.77
25121--25173
26
2.0
26
89
7
81
26
15
26
32
1.95
25147--30458
853
6.0
853
76
10
4727
26
23
23
26
2.00
27737--27841
26
4.0
26
96
0
192
27
20
24
27
1.99
29543--29595
26
2.0
26
100
0
106
26
20
26
26
1.99
28678--30503
891
2.1
889
87
2
2617
26
23
23
26
2.00
30973--31025
26
2.0
26
96
0
97
26
16
24
32
1.97
31401--35246
863
4.4
871
84
6
4822
26
23
24
25
2.00
35911--35963
26
2.0
26
96
0
97
28
20
24
26
1.99
37419--37777
163
2.2
158
82
5
407
22
28
27
21
1.99
38445--38497
26
2.0
26
96
0
97
26
18
26
28
1.98
37583--42616
864
5.7
885
85
4
6198
25
23
24
26
2.00
41985--42037
26
2.0
26
100
0
106
26
20
26
26
1.99
42626--45400
877
3.2
869
88
3
3852
25
24
24
25
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46054--46106
26
2.0
26
92
0
88
26
16
26
30
1.97
45425--47731
890
2.6
880
87
2
3308
25
23
24
26
2.00
48421--48473
26
2.0
26
88
0
79
26
22
18
32
1.97

Tables:   1

The End!