Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167958.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49044

Tables:   1   

This is table  1  of  1  ( 59 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1774--1801
12
2.3
12
100
0
56
7
75
17
0
1.03
3734--3786
26
2.0
26
96
0
97
28
26
18
26
1.98
4631--4683
26
2.0
26
85
0
70
28
24
18
28
1.98
5523--5573
26
2.0
26
92
0
84
31
23
17
27
1.97
6416--6467
26
2.0
26
92
0
86
28
21
19
30
1.97
7301--7353
26
2.0
26
96
0
97
26
28
18
26
1.98
2873--10159
885
8.1
892
86
3
9573
25
24
24
25
2.00
8195--8247
26
2.0
26
100
0
106
26
26
20
26
1.99
10000--10052
26
2.0
26
92
0
88
30
24
20
24
1.99
10647--10821
58
2.9
58
83
6
226
33
13
6
46
1.68
10829--10858
14
2.1
14
93
0
51
76
0
6
16
0.99
10824--10863
14
2.5
17
73
23
50
75
0
10
15
1.05
11348--11386
11
3.5
11
82
0
51
23
28
28
20
1.99
11961--12092
10
12.5
10
69
20
65
66
3
1
28
1.15
11972--12088
21
5.8
21
70
24
74
64
3
1
29
1.19
11959--12105
27
5.2
27
67
20
79
67
3
1
27
1.15
12169--12209
20
2.0
21
95
4
75
21
24
29
24
1.99
12311--12353
7
6.3
7
89
10
63
0
0
11
88
0.52
12304--12339
18
1.9
19
94
5
65
0
0
11
88
0.50
12304--12353
25
2.0
25
88
4
73
0
0
12
88
0.53
12360--12738
41
9.1
42
89
4
576
36
23
16
23
1.94
12360--12738
83
4.6
83
93
3
622
36
23
16
23
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13982--14047
17
3.9
17
75
13
55
6
18
0
75
1.00
13984--14071
22
4.0
21
80
12
97
6
19
0
73
1.05
13984--14044
10
5.9
9
74
25
50
4
16
0
78
0.91
17932--18168
58
4.0
59
89
5
354
34
11
8
45
1.70
18189--18232
17
2.6
17
82
7
54
81
2
4
11
0.92
18219--18258
17
2.4
16
84
8
53
72
0
5
22
1.04
18663--18711
20
2.5
20
89
0
71
16
14
26
42
1.86
19304--19443
14
9.8
13
66
21
59
66
2
2
28
1.17
20308--20360
26
2.0
26
100
0
106
30
26
16
26
1.97
20785--20842
26
2.2
26
81
3
62
56
13
10
18
1.65
21206--21258
26
2.0
26
92
0
88
26
24
22
26
2.00
19570--22058
897
2.8
897
87
2
3538
26
25
23
24
2.00
23826--23878
26
2.0
26
92
0
88
30
26
16
26
1.97
22949--24590
897
1.8
895
88
4
2491
26
24
23
25
2.00
24672--26774
876
2.4
870
85
4
2756
25
24
24
25
2.00
26866--26918
26
2.0
26
96
0
97
28
24
20
26
1.99
27761--27816
26
2.2
26
96
0
103
30
25
17
26
1.97
29453--29505
26
2.0
26
88
0
79
30
24
16
28
1.97
28379--30743
885
2.6
886
84
3
3179
25
24
24
25
2.00
30349--30401
26
2.0
26
96
0
97
26
26
18
28
1.98
30890--30942
26
2.0
26
96
0
97
26
24
20
28
1.99
32192--32244
26
2.0
26
100
0
106
26
26
20
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33673--33725
26
2.0
26
92
0
88
28
22
20
28
1.99
34581--34631
27
1.9
26
84
4
66
27
21
21
29
1.99
35482--35534
26
2.0
26
88
0
79
30
24
18
26
1.98
33018--36312
905
3.7
901
87
3
4520
25
24
23
25
2.00
37060--37115
26
2.2
26
96
0
103
26
26
19
26
1.99
38422--38887
171
2.8
164
77
10
387
19
30
28
22
1.98
38834--41372
899
2.8
896
83
6
3060
25
24
23
25
2.00
42196--42248
26
2.0
26
100
0
106
26
26
20
26
1.99
42930--42980
26
2.0
26
96
0
93
29
25
17
27
1.98
42172--43679
733
2.1
724
87
3
2179
26
23
22
26
2.00
43796--43848
26
2.0
26
92
0
88
26
24
18
30
1.98
42917--45359
883
2.8
878
88
2
3635
26
24
24
25
2.00
45846--45872
12
2.2
12
100
0
54
7
62
14
14
1.51
46763--46815
26
2.0
26
100
0
106
30
26
16
26
1.97
48352--48404
26
2.0
26
100
0
106
30
26
16
26
1.97

Tables:   1

The End!