Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167966.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46882

Tables:   1   2   

This is table  2  of  2  ( 183 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27178--27222
23
1.9
24
90
4
74
71
6
2
20
1.20
27323--27374
14
3.8
14
75
14
54
78
5
0
15
0.92
27619--27670
21
2.4
21
83
6
59
80
0
7
11
0.89
28121--28160
18
2.2
18
86
4
53
77
5
10
7
1.11
28256--28414
8
19.0
8
68
14
54
75
2
5
16
1.10
28322--28395
25
2.8
27
80
13
75
78
0
5
16
0.93
28322--28394
26
2.8
27
80
12
73
78
0
5
16
0.94
28346--28426
30
2.8
29
79
9
92
80
1
4
13
0.94
28332--28428
40
2.5
39
78
13
92
78
1
6
14
1.00
28322--28428
13
7.7
13
73
17
65
78
0
5
14
0.98
28900--29028
23
5.5
22
69
15
73
77
3
4
14
1.05
28978--29020
15
2.7
16
85
7
52
74
0
11
13
1.07
29135--29190
24
2.4
23
80
14
69
71
8
3
16
1.25
30538--30600
23
2.7
23
82
7
74
60
6
7
25
1.48
30707--30765
14
4.1
14
74
21
50
79
3
3
13
0.98
31473--31518
19
2.4
19
85
7
58
80
0
6
13
0.89
31466--31598
7
18.9
7
69
11
67
75
3
6
15
1.13
31466--31572
24
4.2
24
76
12
99
74
1
6
16
1.11
31488--31569
35
2.4
33
78
11
94
74
2
6
17
1.13
31436--32307
473
1.9
466
84
8
1170
67
5
9
17
1.36
31939--32062
48
2.4
50
73
20
114
75
4
5
15
1.15
31987--32078
48
1.9
48
82
8
116
72
5
3
18
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32344--32395
22
2.5
20
76
17
52
69
3
11
15
1.32
32505--32632
7
16.7
7
72
18
62
75
2
5
16
1.09
32537--32614
13
5.9
13
75
8
59
78
2
1
17
0.94
32882--32934
26
2.2
26
80
10
67
79
5
0
15
0.91
33681--33720
18
2.2
18
86
4
53
77
5
10
7
1.11
33888--33974
12
7.2
11
71
17
57
78
0
6
14
0.95
33881--33960
25
3.2
26
81
13
87
77
0
5
17
0.94
33917--33959
14
3.1
14
86
6
61
79
0
4
16
0.90
33888--33954
12
5.4
12
75
21
59
77
0
5
16
0.95
33906--33975
27
2.5
26
77
15
68
78
0
7
14
0.95
34462--34558
46
2.1
46
79
7
108
76
4
5
14
1.11
34672--34727
24
2.4
23
80
14
69
71
8
3
16
1.25
36809--36848
18
2.2
18
86
4
53
77
5
10
7
1.11
37011--37142
7
17.9
7
69
14
70
75
3
5
15
1.10
37011--37117
24
4.4
23
72
16
81
75
1
5
16
1.08
37018--37144
39
3.4
37
71
21
86
75
3
6
14
1.12
36945--37114
8
20.2
8
68
16
60
74
2
5
17
1.15
38033--38160
8
16.7
7
70
22
57
76
2
5
15
1.07
38048--38143
30
3.2
28
75
16
86
78
3
2
16
0.98
39199--39238
18
2.2
18
86
4
53
77
5
10
7
1.11
39405--39450
17
2.8
16
86
6
56
82
2
4
10
0.89
39391--39450
21
3.0
20
85
9
77
80
1
5
13
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39876--39913
17
2.1
19
90
9
62
84
7
0
7
0.79
39847--39912
33
2.0
34
82
8
82
77
6
3
13
1.08
40037--40079
15
2.7
15
85
7
50
74
0
11
13
1.07
40195--40249
24
2.3
23
79
14
67
70
9
3
16
1.27
42372--42410
18
2.2
18
86
9
53
76
5
10
7
1.13
42494--42692
8
23.4
8
67
20
50
73
4
5
16
1.17
42566--42700
20
7.0
19
65
24
61
75
4
5
14
1.14
42559--42691
24
5.2
25
73
14
101
75
3
5
15
1.13
43369--43442
24
3.0
24
73
21
71
70
4
14
10
1.30
43579--43713
8
17.6
7
69
16
65
76
2
5
15
1.08
43821--43897
29
2.8
27
75
13
68
70
6
7
15
1.32
43989--44025
15
2.3
17
86
9
51
78
5
0
16
0.93
44524--44581
26
2.3
24
80
11
62
74
1
5
18
1.10
44761--44799
18
2.1
18
85
4
51
76
5
10
7
1.13
44960--45006
24
1.9
25
86
4
69
76
0
6
17
0.98
45009--45049
20
2.0
21
85
4
57
78
7
2
12
1.06
45420--45490
19
3.8
19
73
19
53
76
5
2
15
1.10
45614--45656
15
2.7
15
85
7
50
74
0
11
13
1.07
46373--46463
34
2.7
31
74
14
83
71
3
7
17
1.23

Tables:   1   2

The End!