Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167979.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_237, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44953

Tables:   1   2   

This is table  2  of  2  ( 173 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28401--28518
59
2.0
60
80
8
134
32
3
9
55
1.48
29710--29766
24
2.5
22
78
16
62
15
5
8
70
1.31
29881--29918
15
2.4
16
86
4
51
15
10
0
73
1.09
29881--29923
15
2.7
15
85
7
50
13
11
0
74
1.07
29881--30125
8
33.4
7
65
19
67
17
5
4
73
1.19
30333--30390
23
2.6
23
81
10
59
15
5
6
72
1.24
30473--30594
7
15.7
7
70
18
66
16
4
3
75
1.11
30719--30760
18
2.3
19
83
8
59
9
9
4
76
1.15
31537--31654
59
2.0
60
80
8
134
32
3
9
55
1.48
32211--32266
28
1.9
28
85
7
76
14
8
1
75
1.13
32243--32320
8
9.5
8
71
8
50
16
5
2
75
1.09
32369--32425
9
6.2
9
75
4
51
15
5
3
75
1.12
32850--32906
24
2.5
22
78
16
62
15
5
8
70
1.31
33021--33058
15
2.4
16
86
4
51
15
10
0
73
1.09
33021--33063
15
2.7
15
85
7
50
13
11
0
74
1.07
33021--33265
8
33.4
7
65
19
67
17
5
4
73
1.19
33473--33530
23
2.6
23
81
10
59
15
5
6
72
1.24
33613--33734
7
15.7
7
70
18
66
16
4
3
75
1.11
33851--33901
18
2.8
19
79
8
61
7
11
3
76
1.13
34038--34073
17
2.1
17
89
0
54
13
2
5
77
1.05
34680--34797
59
2.0
60
80
8
134
32
3
9
55
1.48
35352--35407
28
1.9
28
85
7
76
14
8
1
75
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35384--35461
8
9.5
8
71
8
50
16
5
2
75
1.09
35510--35566
9
6.2
9
75
4
51
15
5
3
75
1.12
35990--36046
24
2.5
22
78
16
62
15
5
8
70
1.31
36162--36199
15
2.4
16
86
4
51
15
10
0
73
1.09
36162--36204
15
2.7
15
85
7
50
13
11
0
74
1.07
36162--36406
8
33.4
7
65
19
67
17
5
4
73
1.19
36614--36671
23
2.6
23
81
10
59
15
5
6
72
1.24
36754--36875
7
15.7
7
70
18
66
16
4
3
75
1.11
36992--37042
18
2.8
19
79
8
61
7
11
3
76
1.13
37179--37214
17
2.1
17
89
0
54
13
2
5
77
1.05
37756--37805
12
4.3
12
72
10
50
24
8
8
60
1.52
37821--37938
59
2.0
60
80
8
134
32
3
9
55
1.48
38493--38548
28
1.9
28
85
7
76
14
8
1
75
1.13
39131--39187
24
2.5
22
78
16
62
15
5
8
70
1.31
39300--39338
15
2.5
16
87
4
53
17
10
0
71
1.12
39300--39343
15
2.8
15
86
6
52
15
11
0
72
1.11
39294--39542
8
33.4
7
66
20
57
17
5
4
72
1.20
39466--39507
18
2.1
21
87
12
63
9
4
7
78
1.08
39516--39561
24
1.9
24
82
8
58
17
6
0
76
1.00
39890--40012
8
15.7
7
69
19
59
16
4
3
75
1.10
39888--39932
17
2.7
18
80
16
53
15
8
0
75
1.03
40137--40178
21
2.0
21
85
4
57
4
9
4
80
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41785--41841
9
6.2
9
74
11
53
15
5
3
75
1.12
41793--41864
18
3.8
18
73
20
58
16
4
6
72
1.23
42265--42321
23
2.4
23
80
11
71
17
5
8
68
1.35
43047--43100
16
3.2
17
75
21
51
16
5
1
75
1.07
43047--43125
7
10.6
7
72
17
52
13
3
5
77
1.08
43470--43505
17
2.1
17
89
0
54
13
2
5
77
1.05
44055--44106
12
4.4
12
73
4
52
23
7
7
61
1.49
44782--44837
28
1.9
28
85
7
76
14
8
1
75
1.13
44710--44834
34
3.7
33
66
19
78
13
10
4
72
1.26

Tables:   1   2

The End!