Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167985.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_242, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44384

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
567--602
18
2.1
18
89
5
56
16
16
0
66
1.25
1463--1491
10
2.7
11
89
10
51
44
0
0
55
0.99
3703--3772
34
2.1
34
89
2
106
14
12
22
50
1.77
4334--4412
36
2.2
36
95
0
140
16
30
31
21
1.95
4491--4755
133
2.0
133
99
0
521
23
20
17
38
1.93
6928--6964
18
2.1
18
90
5
58
16
16
0
67
1.23
7822--7850
10
2.7
11
89
10
51
44
0
0
55
0.99
10065--10134
34
2.1
34
89
2
106
14
12
22
50
1.77
10697--10775
36
2.2
36
95
0
140
16
30
31
21
1.95
10854--11118
133
2.0
133
99
0
521
23
20
17
38
1.93
13286--13322
18
2.1
18
90
5
58
16
16
0
67
1.23
14180--14208
10
2.7
11
89
10
51
44
0
0
55
0.99
16413--16483
34
2.1
34
89
0
106
14
12
22
50
1.76
17041--17119
36
2.2
36
95
0
140
16
30
31
21
1.95
17198--17458
129
2.0
130
96
3
479
22
20
18
38
1.93
21331--21367
19
1.9
19
94
0
65
40
2
0
56
1.13
21606--21653
21
2.2
21
82
10
53
56
6
0
37
1.25
32079--32105
2
13.5
2
100
0
54
48
0
0
51
1.00
33615--33654
17
2.4
17
100
0
80
57
20
5
17
1.58
33848--33944
42
2.3
43
90
3
169
69
2
19
9
1.26
34265--34301
3
12.3
3
94
0
65
32
2
0
64
1.07
37925--37970
20
2.3
20
88
0
65
39
10
4
45
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39524--39593
34
2.1
34
89
2
106
14
12
22
50
1.77
40157--40235
36
2.2
36
95
0
140
16
30
31
21
1.95
42253--42288
17
2.1
17
89
0
54
16
16
0
66
1.25
43136--43164
10
2.7
11
89
10
51
44
0
0
55
0.99

Tables:   1

The End!