Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167986.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_243, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44336

Tables:   1   2   

This is table  2  of  2  ( 194 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26482--26559
22
3.6
22
71
26
69
56
1
3
38
1.26
27077--27118
17
2.4
17
92
4
66
52
0
4
42
1.22
27114--27153
21
1.9
21
85
10
55
42
5
2
50
1.37
27231--27289
31
1.9
30
86
13
84
52
1
1
44
1.21
27235--27287
24
2.3
22
75
12
52
54
1
1
41
1.22
27446--27508
30
2.1
30
85
5
83
41
3
7
47
1.48
27764--27826
27
2.3
26
83
5
72
49
3
3
44
1.34
27801--27835
16
2.3
15
90
5
52
54
2
5
37
1.39
27847--27877
15
2.0
16
93
6
55
45
6
3
45
1.45
27875--27929
25
2.3
26
79
17
66
40
3
3
52
1.36
27940--27997
29
2.0
28
83
9
73
51
1
0
46
1.11
28132--28189
22
2.8
20
77
10
55
41
5
1
51
1.34
28274--28302
14
2.0
15
93
6
51
48
0
0
51
1.00
28271--28315
18
2.7
17
80
13
58
46
0
0
53
1.00
28554--28584
16
1.9
16
93
0
53
48
0
3
48
1.17
29462--29495
17
2.0
17
100
0
68
41
0
0
58
0.98
30086--30156
26
2.8
26
72
18
67
59
4
1
35
1.26
30141--30190
23
2.1
25
85
7
68
52
0
2
46
1.12
30759--30817
23
2.6
24
77
20
65
50
1
1
45
1.21
30766--30817
15
3.6
14
80
17
61
51
0
1
46
1.12
30800--30840
22
1.9
21
85
5
55
43
2
2
51
1.28
30916--31014
23
4.8
21
73
17
75
48
5
1
45
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31537--31583
14
3.4
14
78
18
53
55
0
0
44
0.99
31528--31583
29
2.0
28
86
10
78
55
0
0
44
0.99
31559--31640
20
4.0
20
70
17
60
56
2
0
41
1.13
31545--31628
15
5.6
15
66
18
50
57
2
0
40
1.12
31668--31711
21
2.1
21
83
8
54
52
2
2
43
1.26
31775--31826
24
2.2
25
86
13
74
51
3
0
44
1.19
31830--31885
10
5.7
10
78
17
55
41
0
1
57
1.09
32060--32094
4
9.0
4
87
6
54
45
0
0
54
0.99
32044--32102
23
2.6
23
84
7
68
45
0
0
54
0.99
32044--32094
15
3.4
15
78
7
59
45
0
0
54
0.99
32211--32240
11
2.7
11
94
0
51
43
6
3
46
1.46
32593--32637
13
3.4
13
84
6
54
42
0
2
55
1.12
33600--33667
25
2.7
25
77
15
68
42
2
2
51
1.32
34304--34349
16
3.0
16
78
18
53
50
0
0
50
1.00
34323--34360
19
2.0
19
90
10
60
52
2
0
44
1.14
34333--34420
24
3.7
23
71
16
63
48
4
1
45
1.30
34382--34435
24
2.4
23
84
9
67
50
3
0
46
1.19
34765--34889
10
12.6
10
71
25
63
46
1
2
49
1.24
34780--34869
25
3.7
24
69
24
64
48
0
3
47
1.18
34778--34866
12
7.6
12
69
22
55
48
0
3
48
1.18
34746--34907
30
5.9
29
68
26
79
48
1
1
47
1.23
34973--35019
22
2.2
20
85
7
58
42
4
0
53
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35152--35245
36
2.6
38
80
11
97
45
3
2
48
1.30
35948--35980
14
2.2
16
89
10
52
51
3
0
45
1.16
36180--36227
9
5.6
9
73
26
50
31
6
4
58
1.42
36180--36227
16
2.9
16
82
17
62
31
6
4
58
1.42
37681--37813
12
10.5
13
67
28
65
53
0
0
45
1.11
37829--37898
18
3.7
18
74
16
54
48
1
0
50
1.09
37690--37908
15
14.5
15
67
19
84
51
0
1
46
1.15
38342--38382
13
3.1
13
82
3
55
48
2
2
46
1.28
38340--38381
20
2.2
19
83
12
50
45
2
2
50
1.27
38639--38683
21
2.1
21
84
8
56
37
2
2
57
1.23
38983--39025
22
2.0
22
86
9
61
51
2
2
44
1.27
39005--39084
33
2.4
34
79
8
94
51
0
3
45
1.19
39523--39564
22
1.9
22
85
9
59
42
0
0
57
0.99
39533--39580
25
1.9
25
84
16
64
43
0
2
54
1.12
40678--40749
23
3.1
24
75
16
71
58
1
4
36
1.26
40707--40746
19
2.2
18
86
13
55
57
0
5
37
1.21
40813--40883
32
2.3
32
79
13
85
43
0
1
54
1.08
41418--41475
16
3.6
17
77
15
61
51
1
1
44
1.21
41416--41485
32
2.2
32
85
10
90
50
1
1
47
1.19
41498--41585
22
3.9
22
69
25
67
52
2
0
45
1.13
41522--41585
15
4.2
15
72
18
60
53
3
0
43
1.16
41635--41696
30
2.1
29
85
8
81
41
3
8
46
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41964--42025
26
2.4
25
83
8
70
50
3
3
43
1.34
42000--42034
16
2.3
15
90
5
52
54
2
5
37
1.39
42047--42077
15
2.0
16
93
6
55
45
6
3
45
1.45
42139--42196
29
2.0
28
83
9
73
51
1
0
46
1.11
42490--42545
25
2.3
24
79
11
60
48
3
0
48
1.19
42510--42538
14
2.0
15
93
6
51
48
0
0
51
1.00
42507--42551
18
2.7
17
80
13
58
46
0
0
53
1.00
42790--42820
16
1.9
16
93
0
53
48
0
3
48
1.17

Tables:   1   2

The End!