Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167987.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44224

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1512--1564
26
2.0
26
92
0
88
28
18
24
28
1.98
2811--2861
25
2.0
25
85
7
68
29
19
21
29
1.98
3098--3130
18
1.9
17
88
11
50
48
6
9
36
1.60
3003--3494
180
2.8
177
81
5
499
41
9
9
39
1.69
3555--3596
22
1.9
22
85
9
59
54
0
2
42
1.13
4938--4970
18
1.9
17
88
11
50
48
6
9
36
1.60
4916--5333
175
2.3
181
80
5
483
41
9
9
39
1.70
7298--7335
20
1.9
19
89
5
58
55
5
7
31
1.51
8588--8629
17
2.4
18
84
8
59
61
2
0
35
1.09
9521--9562
17
2.4
18
84
8
59
61
2
0
35
1.09
9634--9673
19
2.1
19
90
4
62
65
2
0
32
1.06
9822--9871
14
3.2
16
81
18
61
46
2
0
52
1.12
10757--10789
18
1.9
17
88
11
50
48
6
9
36
1.60
11214--11255
22
1.9
22
85
9
59
54
0
2
42
1.13
12444--12485
17
2.4
18
84
8
59
61
2
0
35
1.09
13379--13420
17
2.4
18
84
8
59
61
2
0
35
1.09
13490--13528
14
2.7
14
84
4
51
58
0
0
41
0.98
13476--13521
18
2.5
19
79
10
60
52
2
0
45
1.13
13661--13710
14
3.2
16
81
18
61
46
2
0
52
1.12
14435--14974
180
3.0
178
80
5
561
41
9
9
39
1.70
15054--15095
22
1.9
22
85
9
59
54
0
2
42
1.13
15373--15796
173
2.4
177
80
5
439
38
12
8
40
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17442--17481
19
2.1
19
85
4
53
65
2
2
30
1.19
15831--17659
918
2.0
910
92
2
3046
44
8
6
40
1.62
18661--18702
17
2.4
18
84
8
59
61
2
0
35
1.09
19104--19140
19
1.9
19
88
0
56
40
13
8
37
1.74
19200--19528
165
2.0
164
93
0
568
31
13
13
41
1.83
19742--19782
16
2.4
18
84
12
59
60
2
0
36
1.10
19854--19893
19
2.1
19
90
4
62
65
2
0
32
1.06
20972--21004
18
1.9
17
88
11
50
48
6
9
36
1.60
21066--21642
180
3.2
179
78
6
539
40
10
8
40
1.70
22275--22315
16
2.4
18
84
12
59
60
2
0
36
1.10
22736--22773
19
2.0
19
94
0
67
39
10
13
36
1.79
21695--23544
936
2.0
912
91
3
2972
44
8
6
40
1.62
23212--23253
17
2.4
18
84
8
59
61
2
0
35
1.09
23325--23364
19
2.1
19
90
4
62
65
2
0
32
1.06
23513--23562
14
3.2
16
81
18
61
46
2
0
52
1.12
24448--24480
18
1.9
17
88
11
50
48
6
9
36
1.60
24257--24842
181
3.3
179
79
7
514
40
9
9
40
1.70
26245--26281
17
2.1
18
90
5
58
67
0
0
32
0.91
27182--27223
17
2.4
18
84
8
59
61
2
0
35
1.09
27295--27334
19
2.1
19
85
4
53
65
2
2
30
1.19
27482--27532
11
5.1
10
74
25
54
47
1
0
50
1.12
28971--29010
19
2.1
19
85
4
53
65
2
2
30
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29159--29208
14
3.2
16
81
18
61
46
2
0
52
1.12
30201--30242
17
2.4
18
84
8
59
61
2
0
35
1.09
31137--31177
17
2.4
18
80
12
50
60
2
0
36
1.10
29755--31469
935
1.9
911
92
3
2912
43
8
7
40
1.62
31249--31288
19
2.1
19
90
4
62
65
2
0
32
1.06
32738--32779
22
1.9
22
85
9
59
54
0
2
42
1.13
34105--34157
26
2.0
26
96
0
97
26
18
26
28
1.98
34424--34475
26
2.0
26
92
0
86
28
17
25
28
1.97
34238--44224
899
11.2
898
84
5
12179
25
24
24
25
2.00
36219--36271
26
2.0
26
96
0
97
30
18
22
28
1.98
40676--40726
26
2.0
26
96
0
93
27
17
27
27
1.98
41579--41631
26
2.0
26
96
0
97
26
22
24
26
2.00
43342--43394
26
2.0
26
96
0
97
26
18
26
28
1.98

Tables:   1

The End!