Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167998.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_254, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42172

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5802--5854
26
2.0
26
92
0
88
28
20
24
26
1.99
7496--7549
17
3.2
16
82
10
63
18
0
29
51
1.46
9162--9391
88
2.6
88
89
2
338
41
18
19
20
1.91
9375--9437
23
2.8
22
80
2
72
31
20
22
25
1.98
9290--9657
133
2.8
129
83
5
407
36
19
22
21
1.95
9503--9569
23
3.0
23
77
2
82
28
22
25
23
1.99
10340--10584
33
7.5
33
78
4
230
35
16
18
29
1.93
10372--10584
66
3.2
65
84
6
286
35
16
18
29
1.93
10372--10584
98
2.2
99
84
2
277
35
16
18
29
1.93
17974--18027
17
3.2
16
82
10
63
18
0
29
51
1.46
19398--19431
14
2.6
13
90
9
52
14
0
8
76
1.01
19400--19439
15
2.9
14
85
7
55
12
0
10
77
0.99
19648--19700
26
2.0
26
96
0
97
26
22
24
26
2.00
20529--20582
26
2.0
27
92
3
92
25
22
24
27
2.00
21415--21466
26
2.0
25
92
3
86
26
19
25
28
1.98
23202--23254
26
2.0
26
96
0
97
26
22
24
26
2.00
19486--25815
891
7.2
891
87
6
8782
25
24
24
25
2.00
24091--24143
26
2.0
26
96
0
97
26
22
24
26
2.00
26223--28435
890
2.5
884
82
6
2579
26
23
24
25
2.00
30411--30463
26
2.0
26
88
0
79
28
24
22
24
2.00
28545--33824
884
5.9
884
86
2
6971
26
23
23
25
2.00
38581--38632
26
2.0
26
92
3
88
28
23
21
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39478--39530
26
2.0
26
88
0
79
26
24
20
28
1.99
37824--41414
894
4.1
887
84
5
4533
25
24
23
26
2.00
37941--42170
842
4.9
841
77
10
3552
26
23
23
26
2.00

Tables:   1

The End!