Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168007.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_262, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41439

Tables:   1   

This is table  1  of  1  ( 54 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2434--2494
28
2.2
28
80
8
72
60
14
8
16
1.57
3565--3611
18
2.6
18
83
16
62
51
0
4
44
1.21
3565--3600
17
2.0
18
89
10
56
47
0
5
47
1.25
3948--4018
21
3.4
20
77
14
65
80
11
0
8
0.91
3984--4018
10
3.4
10
92
4
52
82
14
0
2
0.77
3962--4018
16
4.1
15
68
22
52
80
12
0
7
0.89
7759--7864
53
2.0
53
98
0
203
31
11
16
41
1.83
13443--13751
32
9.5
32
79
7
284
29
20
15
35
1.93
13438--13751
97
3.2
95
81
8
330
29
19
15
35
1.93
13443--13751
163
1.9
162
87
3
460
29
20
15
35
1.93
13908--13990
41
2.0
41
80
4
94
32
22
14
30
1.94
14336--14606
87
3.1
87
79
2
319
22
21
18
38
1.93
14894--14922
3
9.7
3
100
0
58
68
0
0
31
0.89
15083--15138
20
3.1
17
81
18
69
76
12
1
8
1.08
15090--15150
15
4.1
15
85
10
72
80
11
1
6
0.97
18714--18758
22
2.0
22
86
0
63
37
0
0
62
0.96
19387--19452
1
66.0
1
78
0
69
9
1
0
89
0.55
19387--19455
9
8.0
9
83
13
76
10
1
0
88
0.58
19387--19520
6
22.2
6
72
16
64
16
2
1
79
0.94
19390--19496
20
4.9
20
77
14
97
13
2
1
82
0.87
19388--19455
23
3.1
22
87
12
104
10
1
0
88
0.59
19398--19518
34
3.6
33
76
19
99
17
2
1
78
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19398--19483
7
11.1
8
80
18
53
16
2
0
81
0.79
19677--19702
13
2.0
13
100
0
52
15
0
0
84
0.62
20566--20661
5
18.6
5
72
16
63
14
6
3
76
1.11
20580--20661
17
4.9
17
70
15
55
13
6
2
78
1.04
20585--20662
32
2.5
31
81
4
86
12
7
2
76
1.09
20580--20651
21
3.3
20
79
13
65
12
6
2
77
1.07
20678--21252
59
9.7
57
78
12
522
44
7
11
36
1.69
20678--21252
118
4.8
118
86
5
775
44
7
11
36
1.69
20678--21252
238
2.4
234
90
3
882
44
7
11
36
1.69
21187--21226
16
2.4
17
83
8
55
50
5
0
45
1.23
31002--31127
40
3.0
41
87
4
164
23
17
23
35
1.95
31135--31161
14
1.9
14
100
0
54
92
7
0
0
0.38
31317--31371
1
55.0
1
77
0
56
7
1
1
89
0.63
31324--31371
13
3.5
13
88
11
69
8
0
2
89
0.56
31313--31413
23
4.5
22
78
10
89
15
1
1
80
0.90
31313--31380
13
4.9
13
81
12
64
11
1
1
85
0.74
31313--31413
16
6.7
15
77
13
93
15
1
1
80
0.90
31526--31610
6
14.5
6
73
16
63
14
4
2
78
1.00
31526--31605
17
5.1
15
76
10
72
13
5
2
78
1.01
31533--31612
28
2.8
29
86
7
101
15
3
2
78
0.99
31671--31894
59
3.7
60
82
8
249
42
7
13
36
1.73
35341--38062
181
15.3
178
72
10
1310
40
9
8
40
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35358--41419
363
17.2
355
68
14
1550
41
10
8
39
1.70
37222--37257
18
1.9
19
88
5
56
52
0
0
47
1.00
38085--38727
180
3.6
174
77
7
540
41
9
9
39
1.70
38569--38869
158
1.9
158
82
6
383
40
10
11
36
1.76
38799--39228
186
2.3
179
78
10
433
43
8
10
37
1.69
39602--40042
180
2.5
180
81
3
487
41
10
7
39
1.69
39906--40230
157
2.1
157
80
5
370
41
9
8
41
1.67
39730--40370
334
1.9
336
81
4
767
41
9
8
40
1.69
39398--40770
697
2.0
696
79
7
1493
42
9
7
40
1.67
40634--40953
176
1.8
176
81
4
403
42
10
9
37
1.72

Tables:   1

The End!