Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168021.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_275, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40375

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181--213
18
1.9
17
88
11
50
48
6
9
36
1.60
159--560
180
2.2
181
83
4
503
42
8
8
39
1.68
1985--2026
17
2.4
18
84
8
59
61
2
0
35
1.09
2920--2955
17
2.1
18
89
5
56
66
0
0
33
0.92
3015--3052
19
2.0
20
94
5
69
63
5
2
28
1.30
3201--3250
14
3.2
16
81
18
61
46
2
0
52
1.12
4133--4168
16
2.1
17
90
10
56
44
11
5
38
1.63
4040--4532
180
2.8
178
81
5
489
41
9
9
39
1.70
4593--4634
22
1.9
22
85
9
59
54
0
2
42
1.13
6778--6813
16
2.1
17
90
10
56
44
11
5
38
1.63
6685--7177
180
2.8
177
81
4
512
41
9
9
39
1.69
7238--7279
22
1.9
22
85
9
59
54
0
2
42
1.13
9846--9878
18
1.9
17
88
11
50
48
6
9
36
1.60
9824--10241
179
2.3
177
82
5
475
42
9
8
39
1.68
10302--10343
22
1.9
22
85
9
59
54
0
2
42
1.13
11665--11699
17
2.1
17
88
0
52
62
0
0
37
0.95
12595--12635
16
2.4
18
84
12
59
60
2
0
36
1.10
12696--12747
18
2.9
17
83
11
59
63
0
0
36
0.95
13507--13548
17
2.4
18
84
8
59
61
2
0
35
1.09
13620--13659
19
2.1
19
90
4
62
65
2
0
32
1.06
11079--13835
912
3.0
909
93
2
4622
44
8
6
40
1.62
13843--13867
12
2.1
12
100
0
50
36
8
0
56
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14241--14297
22
2.5
22
80
8
62
50
1
3
43
1.29
15871--15903
18
1.9
17
88
11
50
48
6
9
36
1.60
15849--16267
180
2.3
178
81
3
484
42
8
8
40
1.67
16328--16369
22
1.9
22
85
9
59
54
0
2
42
1.13
17688--17729
17
2.4
18
84
8
59
61
2
0
35
1.09
17794--17844
26
1.9
26
88
4
75
64
1
0
33
1.05
17801--17838
19
1.9
19
89
5
58
65
2
0
31
1.06
17989--18038
14
3.2
16
81
18
61
46
2
0
52
1.12
18926--18958
18
1.9
17
88
11
50
48
6
9
36
1.60
18764--19317
180
3.1
177
79
5
569
41
9
9
40
1.69
19383--19424
22
1.9
22
85
9
59
54
0
2
42
1.13
20982--21014
18
1.9
17
88
11
50
48
6
9
36
1.60
20960--21378
181
2.3
181
81
4
483
41
9
9
39
1.69
22786--22827
17
2.4
18
84
8
59
61
2
0
35
1.09
23708--23749
17
2.4
18
88
8
68
64
2
0
33
1.07
22205--24950
922
3.0
933
93
3
4579
43
9
6
40
1.63
24638--24679
17
2.4
18
84
8
59
61
2
0
35
1.09
24919--24961
14
2.8
16
80
20
56
44
2
0
53
1.13
26619--27053
173
2.5
176
77
7
427
40
11
7
40
1.71
28445--28477
18
1.9
17
88
11
50
48
6
9
36
1.60
28902--28943
22
1.9
22
85
9
59
54
0
2
42
1.13
28989--29035
20
2.3
21
78
10
53
48
0
4
46
1.21

Tables:   1

The End!