Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168022.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_276, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40149

Tables:   1   2   

This is table  2  of  2  ( 174 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28334--28389
13
4.2
13
77
8
58
42
0
0
57
0.99
28454--28510
29
2.0
29
82
6
71
63
0
0
36
0.95
28596--28634
16
2.4
16
87
8
53
53
0
0
46
1.00
29062--29115
19
2.8
20
80
11
67
46
1
0
51
1.11
29400--29430
14
2.2
14
94
0
53
61
0
0
38
0.96
29565--29618
22
2.5
21
90
6
81
44
7
1
46
1.42
29704--29752
16
3.1
16
77
11
55
42
2
0
55
1.11
29782--29820
16
2.4
16
84
12
53
43
0
2
53
1.14
29818--29879
17
3.9
17
72
21
53
43
8
0
48
1.32
29975--30016
22
1.9
22
85
0
57
50
4
2
42
1.36
30140--30198
29
2.0
30
80
9
68
44
3
1
50
1.28
30268--30324
20
2.8
20
84
12
71
52
0
0
47
1.00
30267--30321
21
2.6
21
85
5
76
52
0
0
47
1.00
30436--30492
25
2.3
23
80
16
62
36
0
5
57
1.21
30925--31001
41
1.9
39
84
10
102
44
2
2
50
1.29
30994--31077
36
2.4
36
82
9
93
51
3
0
45
1.18
31430--31473
19
2.4
18
84
3
52
50
9
0
40
1.34
31483--31570
24
3.7
22
72
15
68
47
0
1
51
1.08
31481--31569
20
4.5
20
67
21
62
48
0
1
50
1.08
31463--31571
14
7.4
14
73
20
64
48
0
0
50
1.07
31483--31607
10
12.1
10
70
17
51
46
2
0
50
1.20
32320--32365
14
3.2
14
78
6
56
45
2
2
50
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32662--32700
3
12.7
3
89
5
60
64
2
0
33
1.08
33504--33537
12
2.8
12
91
8
52
44
0
0
55
0.99
33502--33544
15
2.9
15
82
0
50
44
0
0
55
0.99
33689--33734
11
4.2
11
76
20
51
60
0
0
39
0.97
33686--33727
18
2.3
18
84
12
50
64
0
0
35
0.94
33737--33775
12
3.3
12
85
3
53
48
2
0
48
1.15
34197--34314
9
13.3
9
63
16
50
47
0
0
50
1.12
34196--34255
16
3.9
15
77
14
52
45
1
1
51
1.21
34195--34316
14
8.7
14
65
25
53
48
0
0
50
1.12
34329--34361
16
1.9
18
88
11
52
51
6
0
42
1.26
34497--34557
17
3.2
19
77
17
56
54
1
1
42
1.20
35321--35399
28
2.9
29
80
16
80
48
0
1
50
1.08
35342--35391
16
2.9
16
78
18
55
46
0
0
54
1.00
35341--35397
9
6.4
9
76
9
55
49
0
0
50
1.00
35860--35890
14
2.3
14
94
5
55
48
0
0
51
1.00
36092--36163
12
6.0
12
69
15
51
47
0
0
52
1.00
36153--36197
15
3.0
15
81
9
56
46
0
2
51
1.13
36431--36472
18
2.5
16
75
24
50
47
0
2
50
1.14
36405--36513
32
3.7
29
76
17
91
47
0
2
49
1.15
36439--36516
33
2.5
32
85
10
99
47
0
2
50
1.15
36948--36997
19
2.7
18
81
6
55
50
0
0
50
1.00
36956--37025
26
2.9
25
86
14
94
45
1
0
52
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37238--37332
49
1.9
49
81
8
113
43
4
1
51
1.28
37315--37341
13
2.1
13
100
0
54
37
0
0
62
0.95
37291--37390
20
4.7
21
73
21
66
44
1
2
53
1.19
38883--38925
13
3.6
12
85
14
54
48
0
2
48
1.14
39008--39056
24
2.0
24
84
0
62
51
2
0
46
1.12
39020--39134
34
3.3
34
73
16
94
50
0
0
48
1.06
39075--39177
26
3.9
25
70
22
68
51
0
0
46
1.14
39092--39194
9
11.3
9
73
22
58
51
0
0
47
1.07
39146--39253
25
4.2
27
78
17
90
50
0
0
47
1.13
39765--39807
22
2.0
22
86
9
61
53
6
0
39
1.28

Tables:   1   2

The End!