Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168033.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38845

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2250--2292
20
2.1
21
95
4
79
16
13
39
30
1.87
3800--4189
173
2.3
171
80
0
438
23
24
26
25
2.00
11346--11383
19
2.0
19
94
0
67
26
44
10
18
1.82
12072--12160
45
2.0
45
84
0
115
20
24
34
20
1.96
12077--12679
293
2.1
293
80
3
651
23
29
27
19
1.98
12646--12766
45
2.7
45
83
2
145
23
30
29
15
1.96
13782--13839
26
2.2
26
93
0
98
27
22
18
31
1.97
13875--14229
157
2.3
156
80
2
363
25
27
23
24
2.00
23926--23969
22
2.0
22
95
0
79
22
38
18
20
1.93
32726--32767
19
2.2
20
86
4
59
26
4
2
66
1.23
33144--33193
16
2.8
18
82
11
59
68
6
0
26
1.13
33175--33213
12
3.2
12
89
7
60
69
12
0
17
1.19
34000--34058
3
20.0
3
84
10
68
66
1
1
30
1.12
34014--34073
32
1.9
30
90
6
93
68
1
3
26
1.15
34240--34525
38
7.4
38
85
5
371
45
21
8
24
1.80
34240--34525
117
2.5
115
88
4
418
45
21
8
24
1.80
34240--34525
155
1.9
152
89
3
448
45
21
8
24
1.80

Tables:   1

The End!