Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167848.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79424

Tables:   1   

This is table  1  of  1  ( 80 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1348--1406
26
2.2
27
78
3
66
64
10
5
20
1.43
1767--1819
26
2.0
26
100
0
106
26
26
20
26
1.99
1--4291
893
4.8
893
87
3
5917
26
24
23
24
2.00
5174--7354
701
3.1
701
87
5
2858
26
23
23
26
2.00
7470--7522
26
2.0
26
100
0
106
26
26
20
26
1.99
8842--9130
58
5.0
58
90
3
415
33
12
9
45
1.73
9138--9167
14
2.1
14
93
0
51
76
0
6
16
0.99
9181--9220
17
2.4
16
84
8
53
72
0
5
22
1.04
9266--9290
10
2.5
10
100
0
50
76
8
0
16
1.02
9631--9673
20
2.2
20
91
0
68
9
13
25
51
1.71
9638--9682
20
2.2
20
84
7
56
15
17
28
37
1.91
10333--10377
3
15.0
3
82
17
58
68
2
0
28
1.01
10579--10633
8
6.3
9
82
14
71
0
0
10
89
0.50
10579--10633
1
55.0
1
77
0
56
0
0
10
89
0.50
10579--10634
16
3.4
16
90
4
85
0
0
12
87
0.54
10644--10785
41
3.5
41
87
0
203
35
26
15
22
1.94
10759--10811
26
2.0
26
96
0
97
35
28
15
20
1.93
10718--10852
67
2.0
67
95
0
243
35
26
16
21
1.94
10677--10893
108
2.0
108
92
0
362
35
25
16
21
1.94
10785--11002
41
5.3
42
92
4
356
36
22
18
21
1.95
10789--11002
83
2.6
83
91
5
353
35
23
19
21
1.95
12208--12269
24
2.4
24
84
13
70
3
17
1
77
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12227--12284
14
4.1
14
78
14
57
3
17
1
77
0.99
12257--12295
20
2.0
20
89
0
60
10
23
0
66
1.22
16815--16856
3
14.0
3
81
18
52
69
2
0
28
1.01
17687--17739
26
2.0
26
96
0
97
26
24
20
28
1.99
18562--18614
26
2.0
26
92
0
88
28
24
18
28
1.98
20328--20380
26
2.0
26
100
0
106
26
26
20
26
1.99
16973--20785
898
4.3
874
86
4
5265
25
24
23
25
2.00
21152--21204
26
2.0
26
92
0
88
30
26
18
24
1.98
24060--29709
867
6.5
866
84
5
6866
25
24
24
25
2.00
30663--30715
26
2.0
26
85
7
72
30
22
16
30
1.96
31557--31609
26
2.0
26
88
0
79
32
26
16
24
1.97
32453--32505
26
2.0
26
88
0
79
28
24
20
26
1.99
33355--33407
26
2.0
26
100
0
106
26
26
20
26
1.99
34245--34297
26
2.0
26
88
0
79
30
24
16
28
1.97
35139--35190
25
2.0
26
92
3
88
26
21
21
30
1.98
36015--36067
26
2.0
26
96
0
97
28
26
18
26
1.98
36906--36956
26
2.0
26
92
0
84
23
23
19
33
1.97
29751--39867
894
11.3
893
85
4
12781
25
24
24
25
2.00
37808--37860
26
2.0
26
96
0
97
26
24
20
28
1.99
39578--39630
26
2.0
26
92
0
88
28
24
18
28
1.98
40957--41012
26
2.2
26
100
0
112
32
25
16
26
1.96
39892--45834
900
6.7
872
84
6
7192
25
25
24
25
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43606--43658
26
2.0
26
96
0
97
26
24
22
26
2.00
44509--44561
26
2.0
26
96
0
97
28
26
18
26
1.98
45208--46471
626
2.0
626
85
4
1675
21
25
26
25
2.00
46930--46982
26
2.0
26
100
0
106
26
26
20
26
1.99
45842--47735
893
2.1
894
88
1
2864
25
24
24
25
2.00
48628--48680
26
2.0
26
88
0
79
26
28
20
24
1.99
50394--50446
26
2.0
26
92
0
88
28
24
18
28
1.98
47892--54222
899
7.1
898
87
3
8623
25
24
24
25
2.00
53985--54036
26
2.0
26
96
0
95
26
25
19
28
1.98
54303--54355
26
2.0
26
100
0
106
26
26
20
26
1.99
57061--57110
14
3.2
16
81
18
61
52
0
2
46
1.12
57370--57411
17
2.4
18
84
8
59
35
0
2
61
1.09
57079--60658
935
3.9
935
93
2
6197
40
6
8
43
1.62
60171--60212
17
2.4
18
84
8
59
35
0
2
61
1.09
61205--61254
14
3.2
16
81
18
61
52
0
2
46
1.12
62885--62934
14
3.2
16
81
18
61
52
0
2
46
1.12
63193--63234
17
2.4
18
84
8
59
35
0
2
61
1.09
64132--64168
17
2.1
18
90
5
58
32
0
0
67
0.91
63005--64847
936
2.0
921
86
6
2468
40
7
9
42
1.65
65936--65968
18
1.9
17
88
11
50
36
9
6
48
1.60
66859--66900
14
2.9
14
80
20
50
50
0
2
47
1.14
67163--67204
17
2.4
18
84
8
59
35
0
2
61
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67782--67812
13
2.4
13
94
0
53
48
0
0
51
1.00
68069--68110
17
2.4
18
84
8
59
35
0
2
61
1.09
66871--68692
909
2.0
904
90
5
2885
40
7
8
43
1.63
70802--70851
14
3.2
16
81
18
61
52
0
2
46
1.12
71111--71152
17
2.4
18
84
8
59
35
0
2
61
1.09
72047--72088
17
2.4
18
84
8
59
35
0
2
61
1.09
75054--75086
18
1.9
17
88
11
50
36
9
6
48
1.60
75973--76022
14
3.2
16
81
18
61
52
0
2
46
1.12
76264--76305
17
2.4
18
84
8
59
35
0
2
61
1.09
77196--77237
17
2.4
18
84
8
59
35
0
2
61
1.09
78656--79091
179
2.4
176
84
4
525
39
9
9
42
1.69
79018--79050
18
1.9
17
88
11
50
36
9
6
48
1.60
78629--79144
179
2.9
177
82
5
515
40
10
8
40
1.70
78654--79167
177
2.9
176
82
5
482
40
9
9
40
1.69

Tables:   1

The End!