Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168074.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34810

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20--1975
181
10.9
179
74
10
1180
39
8
10
42
1.69
20--1059
183
5.8
179
76
9
632
40
8
9
41
1.69
1569--1977
178
2.3
179
78
5
443
36
7
12
42
1.72
1997--5003
181
16.6
179
73
8
1820
40
8
10
40
1.69
3171--3214
22
2.0
22
100
0
88
45
9
9
36
1.68
2446--3925
741
2.0
741
80
6
1699
40
8
10
40
1.70
1997--5003
362
8.3
357
75
8
2163
40
8
10
40
1.69
5866--5921
21
2.7
21
78
10
62
17
25
32
25
1.97
6490--6529
20
2.0
20
95
0
71
47
20
2
30
1.63
6523--6559
18
2.1
18
94
0
65
37
21
2
37
1.68
14894--25472
181
59.2
180
75
8
6853
40
8
9
41
1.68
16131--16186
18
3.1
20
73
23
61
39
5
14
41
1.68
16904--17224
167
1.9
168
85
4
452
40
6
9
43
1.64
17071--25985
361
25.0
358
75
9
5747
40
8
9
41
1.68
18973--19291
160
2.0
160
81
2
372
41
7
8
42
1.63
22555--23050
174
2.8
173
78
11
440
38
8
10
42
1.70
25474--25984
182
2.9
175
77
8
467
38
9
9
42
1.71
25859--26117
137
1.9
137
82
4
326
40
5
11
42
1.65
25992--27424
176
8.0
176
77
6
1271
39
8
10
41
1.69
25993--27415
537
2.7
527
78
7
1451
40
8
10
41
1.70
27358--27481
64
2.0
61
93
4
212
36
9
9
44
1.70
27463--28186
179
4.1
175
75
11
584
41
8
9
40
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28183--30899
180
15.1
179
76
6
2046
40
10
8
40
1.70
31305--34769
181
19.4
181
75
10
2222
42
10
7
39
1.68
34185--34653
174
2.7
172
80
9
434
44
10
7
38
1.66

Tables:   1

The End!