Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168075.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_323, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34721

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--4383
180
24.7
179
75
9
3152
41
9
8
39
1.68
68--4288
541
7.9
529
74
11
2376
41
9
8
39
1.69
5101--11383
181
35.3
181
76
8
4467
40
8
9
40
1.69
6728--7040
164
1.9
165
82
4
391
41
8
8
40
1.67
6891--16502
363
27.1
359
73
11
5574
40
8
9
41
1.68
12397--16502
177
23.2
179
74
10
2644
40
7
9
42
1.67
12380--16502
180
23.2
180
75
8
2878
40
7
9
42
1.67
5101--16501
708
16.1
706
74
11
5771
40
8
9
41
1.68
16381--16615
116
2.1
115
82
4
278
40
7
10
42
1.66
16510--18898
180
13.3
180
75
9
1782
40
8
9
41
1.68
16833--22030
181
28.7
180
71
11
2388
40
8
10
41
1.68
16510--18896
538
4.4
534
80
6
2010
40
8
9
41
1.68
18989--19036
16
2.8
17
81
12
62
45
0
8
45
1.33
19517--21897
539
4.4
535
77
8
1507
39
8
10
41
1.69
20622--21140
180
3.0
165
78
9
443
39
8
10
41
1.69
21047--21079
16
2.0
17
88
5
50
42
3
15
39
1.62
24220--24259
20
2.0
20
85
9
55
50
0
12
37
1.41
29924--32642
180
15.2
179
75
7
1903
39
8
9
41
1.69
29925--32602
717
3.7
709
77
7
2299
39
8
10
41
1.69
32728--34685
179
11.0
177
73
11
1180
37
8
11
42
1.71
33014--33929
353
2.6
349
76
9
765
37
8
11
41
1.73
32705--34113
530
2.6
528
84
5
1680
38
8
11
41
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32705--34664
530
3.7
521
81
7
1664
37
8
11
42
1.72

Tables:   1

The End!