Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168109.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31981

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--588
178
2.7
175
80
7
513
42
8
9
39
1.68
700--21914
181
116.5
181
70
11
6563
40
8
10
41
1.69
688--23735
362
63.9
358
73
10
11600
40
8
10
41
1.69
1269--1586
176
1.8
177
79
3
381
41
9
9
40
1.69
4237--4286
16
2.8
19
74
20
54
44
8
12
36
1.71
5846--23735
361
50.0
360
76
7
13189
40
8
10
41
1.69
8966--9008
18
2.5
17
85
14
54
34
0
4
60
1.17
10329--10364
16
2.1
17
90
10
56
44
8
5
41
1.58
13629--14000
158
2.4
154
76
13
369
39
8
8
43
1.66
13629--14083
163
2.8
155
73
14
408
40
7
9
41
1.66
13944--14659
177
4.0
177
72
11
542
37
8
11
43
1.70
18894--18949
18
3.1
20
73
23
61
39
5
12
42
1.65
22010--23735
181
9.7
179
74
9
1141
40
8
9
41
1.69
14991--23735
542
16.3
528
74
10
1787
40
8
10
41
1.69
23789--27426
181
20.4
178
74
9
1769
39
8
9
41
1.68
23789--27690
355
11.0
359
74
9
2228
39
8
9
42
1.68
25315--27940
181
14.8
179
74
9
1620
38
8
10
42
1.69
27814--28071
137
1.9
135
79
10
292
39
5
12
43
1.64
27451--28432
492
2.0
496
84
4
1286
38
8
10
42
1.71
27947--31645
180
20.5
180
76
8
2621
39
8
10
41
1.70
28822--28867
18
2.6
18
100
0
92
32
4
6
56
1.45
28822--28873
18
3.1
16
91
8
61
34
3
5
55
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28850--31630
181
15.5
181
75
8
1981
39
8
10
41
1.70
27947--31477
361
9.8
357
75
8
2435
39
8
10
41
1.70

Tables:   1

The End!