Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168179.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_417, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27825

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--1624
179
9.0
181
78
7
1372
39
8
10
41
1.70
2901--4256
181
7.5
181
77
6
518
40
7
9
42
1.66
3178--4685
720
2.1
716
81
4
1755
40
8
9
41
1.68
4622--4791
86
2.0
86
81
4
200
44
10
10
34
1.73
4701--13303
181
48.1
181
74
8
5300
39
8
10
41
1.68
6025--6049
13
1.9
13
100
0
50
40
8
12
40
1.72
4701--14821
362
28.4
361
73
9
5965
40
8
9
41
1.68
9393--9427
18
1.9
18
88
0
52
48
5
5
40
1.51
9812--9855
19
2.3
19
84
7
54
40
4
2
52
1.34
10358--10674
173
1.8
174
83
9
425
39
9
10
40
1.72
10246--10674
166
2.5
173
79
9
431
40
10
10
39
1.73
13592--13632
20
2.0
22
85
9
59
46
9
14
29
1.77
13335--14756
181
7.9
182
77
9
1150
40
9
9
41
1.68
13307--14758
540
2.7
536
79
7
1447
40
9
9
41
1.69
13335--14758
359
4.0
352
76
9
1125
40
8
9
41
1.68
14837--21912
181
39.6
177
74
8
4097
42
9
7
40
1.66
16923--16973
21
2.4
21
81
12
61
39
5
1
52
1.37
17426--17734
171
1.8
172
82
2
406
42
8
7
40
1.65
21596--22239
327
2.0
327
82
6
806
42
8
8
40
1.65
21971--23011
181
5.9
178
74
8
648
41
9
7
42
1.65
23067--23754
179
3.9
179
73
10
451
43
9
8
39
1.68
23651--23956
166
1.8
166
83
6
406
44
7
8
39
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24142--24772
181
3.5
179
79
8
640
41
10
7
39
1.68
24968--27801
181
15.8
180
71
12
820
42
10
8
39
1.68
26492--27782
182
7.2
177
73
11
678
42
10
7
39
1.67

Tables:   1

The End!