Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168180.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_418, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27751

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1854--1906
26
2.0
26
92
0
88
26
24
20
28
1.99
4505--4556
26
2.0
26
88
3
79
30
21
19
28
1.97
1790--5475
896
4.2
889
83
4
4373
25
23
24
25
2.00
5583--5659
26
3.0
26
92
0
127
27
25
19
27
1.99
5609--15846
897
11.3
895
74
10
6560
25
24
24
25
2.00
8969--9021
26
2.0
26
96
0
97
22
24
22
30
1.99
7955--9318
680
2.0
680
87
2
1979
21
26
27
24
1.99
9886--10235
162
2.2
161
81
6
390
20
28
28
22
1.99
10209--10261
26
2.0
26
88
0
79
30
24
18
26
1.98
11098--11150
26
2.0
26
85
0
70
30
18
18
32
1.96
9981--15846
897
6.6
894
84
4
7046
26
24
23
25
2.00
11996--12069
26
2.8
26
100
0
148
25
27
20
27
1.99
14688--14738
26
2.0
26
96
0
93
29
25
17
27
1.98
15971--16118
74
2.0
74
100
0
296
27
14
21
36
1.93
20566--20644
26
3.0
26
87
3
106
30
20
20
29
1.97
21489--21541
26
2.0
26
92
0
88
26
22
22
28
1.99
20603--23722
894
3.5
884
86
4
4140
25
24
24
26
2.00
23924--23975
26
2.0
26
88
3
79
26
23
21
28
1.99
23092--24394
672
1.9
672
88
2
1960
23
24
25
27
2.00
24707--24759
26
2.0
26
88
0
79
28
22
22
26
1.99
24704--27265
899
2.9
896
88
2
3738
25
23
24
26
2.00
26508--26559
26
2.0
26
92
0
86
32
21
19
26
1.97

Tables:   1

The End!