Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168206.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_441, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26768

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
389--441
26
2.0
26
96
0
97
28
26
18
26
1.98
1222--1274
26
2.0
26
96
0
97
26
24
22
26
2.00
2123--2175
26
2.0
26
92
0
88
24
24
22
28
2.00
981--7718
900
7.5
900
85
3
8637
24
24
24
25
2.00
3889--3941
26
2.0
26
92
0
88
28
24
18
28
1.98
6587--6639
26
2.0
26
88
0
79
26
26
16
30
1.97
7483--7534
26
2.0
26
100
0
104
26
26
19
26
1.99
7799--7851
26
2.0
26
96
0
97
28
26
18
26
1.98
10559--10608
14
3.2
16
81
18
61
52
0
2
46
1.12
12239--12283
18
2.5
18
82
10
56
51
0
2
46
1.13
12549--12590
17
2.4
18
84
8
59
35
0
2
61
1.09
13029--13066
19
2.0
19
89
0
58
34
13
13
39
1.83
13488--13528
16
2.4
18
84
12
59
36
0
2
60
1.10
14269--14729
180
2.6
179
81
4
527
41
8
9
40
1.68
14797--14829
18
1.9
17
88
11
50
36
9
6
48
1.60
15984--16025
17
2.4
18
84
8
59
35
0
2
61
1.09
16917--16957
17
2.4
18
80
12
50
36
0
2
60
1.10
15693--17520
933
2.0
893
90
5
2872
40
7
8
43
1.63
18724--18756
18
1.9
17
88
11
50
36
9
6
48
1.60
19642--19691
14
3.2
16
81
18
61
52
0
2
46
1.12
19951--19991
16
2.4
18
84
12
59
36
0
2
60
1.10
20883--20924
17
2.4
18
84
8
59
35
0
2
61
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21807--21848
17
2.4
18
84
8
59
35
0
2
61
1.09
22725--22766
17
2.4
18
84
8
59
35
0
2
61
1.09
19664--23347
918
4.0
926
93
3
6058
40
6
8
43
1.62
23694--23726
16
2.1
16
94
5
59
36
15
12
36
1.84
24060--24112
14
3.4
16
78
19
58
49
0
1
49
1.12
24994--25031
19
2.0
20
94
5
69
39
0
2
57
1.12
25101--25142
17
2.4
18
84
8
59
35
0
2
61
1.09

Tables:   1

The End!