Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168221.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26277

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
469--6750
181
35.2
179
74
10
3899
41
10
8
40
1.68
1604--4315
179
15.2
174
72
13
715
41
9
7
41
1.67
2471--2526
18
3.1
20
73
23
61
41
14
5
39
1.68
1604--7391
181
32.2
180
73
10
723
41
10
8
40
1.69
1424--25178
541
44.2
541
74
9
14518
41
10
8
40
1.69
7513--21834
181
79.5
181
74
9
8800
41
9
8
40
1.68
18957--21834
361
8.0
358
75
9
2146
41
10
8
40
1.69
21214--21259
25
2.0
25
87
12
71
36
13
4
45
1.63
21669--21956
156
1.9
155
88
2
434
39
10
7
42
1.68
21825--22733
180
5.0
178
76
9
762
41
10
7
41
1.67
21825--22872
180
5.7
182
75
9
618
40
10
8
40
1.69
21825--22872
181
5.7
180
75
10
498
40
10
8
40
1.69
22729--23022
146
2.0
147
84
2
385
36
11
12
39
1.80
22952--25158
179
12.3
179
74
9
1487
42
9
8
39
1.68
22902--25158
356
6.3
354
76
9
1318
42
10
8
39
1.69
25084--25116
18
1.9
17
88
11
50
42
6
3
48
1.43
25278--26099
179
4.6
177
76
6
678
41
10
8
39
1.70
25273--26099
359
2.3
358
80
6
897
41
10
8
39
1.70

Tables:   1

The End!