Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168223.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_457, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26145

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--395
172
2.2
179
77
9
429
40
7
11
41
1.68
389--2020
181
9.2
178
73
10
955
40
11
8
38
1.72
1795--1831
18
2.0
19
94
5
67
32
16
8
43
1.77
2026--3606
181
8.8
181
76
6
1163
39
9
9
41
1.70
2031--3606
361
4.4
361
77
7
1351
39
9
9
41
1.69
2247--3245
542
1.8
541
81
4
1233
39
9
8
41
1.68
3117--3166
17
2.8
19
67
14
52
40
6
10
44
1.63
4200--5054
180
4.8
179
76
8
739
41
9
7
40
1.66
4275--5027
349
2.1
350
80
7
799
42
9
8
39
1.66
7114--7873
179
4.3
178
76
8
602
40
8
8
42
1.67
7628--7669
18
2.4
18
84
15
61
38
9
7
45
1.64
7871--8675
180
4.5
179
79
5
836
40
7
10
42
1.66
20400--20568
91
1.9
91
82
2
214
21
32
26
19
1.97
20662--20851
45
4.2
45
72
5
159
21
30
28
18
1.97
20602--20850
135
1.8
135
83
0
327
21
30
29
18
1.97
21736--22069
150
2.2
148
82
4
377
26
23
27
23
2.00
22417--22453
19
1.9
19
94
0
65
24
29
10
35
1.89
22490--22915
158
2.7
158
81
2
473
19
25
27
27
1.99

Tables:   1

The End!