Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168229.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_462, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26063

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
779--831
26
2.0
26
89
7
81
26
18
24
30
1.98
1575--1603
11
2.6
11
100
0
58
10
24
41
24
1.86
2479--2511
11
3.0
11
100
0
66
18
36
27
18
1.94
1--7979
906
8.9
900
84
4
9537
26
23
23
26
2.00
6138--6190
26
2.0
26
88
0
79
28
20
22
28
1.99
7031--7083
26
2.0
26
92
0
88
26
20
24
28
1.99
7938--7995
26
2.2
26
90
0
89
34
15
22
27
1.94
7950--8005
26
2.2
26
96
0
103
32
16
21
30
1.95
8003--8069
34
2.0
34
96
0
125
23
25
35
14
1.94
8707--8759
26
2.0
26
88
0
79
30
22
20
26
1.98
8037--10567
895
2.9
882
87
3
3628
26
23
24
26
2.00
13008--13060
26
2.0
26
96
0
97
26
22
24
26
2.00
10512--15773
883
5.9
895
85
4
6686
26
23
23
26
2.00
14748--14800
26
2.0
26
92
0
88
26
20
24
28
1.99
22376--22425
26
1.9
26
83
0
64
30
22
20
28
1.98
21632--24369
895
3.1
886
89
3
4180
25
24
24
25
2.00
25561--25613
26
2.0
26
85
0
70
30
20
20
28
1.98

Tables:   1

The End!