Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168244.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25641

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1803--2479
349
1.9
349
83
7
870
21
10
24
43
1.83
1301--8038
879
7.7
875
94
2
11432
21
11
23
44
1.84
9803--9851
22
2.2
22
82
7
64
18
2
4
75
1.06
9921--9988
27
2.5
26
82
17
77
14
4
2
77
1.04
9922--10032
37
3.2
34
78
15
111
16
3
3
76
1.07
10002--10092
20
4.6
20
68
12
53
15
3
5
75
1.11
10047--10115
24
2.9
23
75
10
68
14
5
2
76
1.08
10731--10811
7
11.6
7
75
5
65
17
2
4
75
1.09
10736--10826
18
4.4
19
71
19
58
18
3
5
72
1.18
10819--10866
23
2.0
24
88
4
71
12
6
0
81
0.87
10790--10864
18
3.9
19
77
13
57
14
5
2
77
1.06
10891--10924
17
1.9
17
88
5
50
11
2
0
85
0.71
11028--11069
20
2.0
21
81
4
50
11
9
4
73
1.22
11451--11481
15
2.1
15
93
0
53
12
9
0
77
0.99
12114--12166
23
2.3
23
75
12
54
20
9
1
67
1.28
12888--12932
7
6.3
7
84
5
54
17
4
0
77
0.92
12889--12952
24
2.8
23
81
6
67
18
4
1
75
1.06
12887--12988
28
3.9
25
71
14
71
15
5
2
75
1.12
12965--13004
16
2.4
16
84
15
55
12
7
0
80
0.91
12937--13004
20
3.8
18
76
18
70
14
5
2
76
1.09
13615--13736
7
16.7
7
68
15
52
16
5
2
75
1.10
13616--13725
21
5.1
21
72
11
80
15
6
2
75
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14862--14931
32
2.2
33
81
2
79
11
11
5
71
1.30
15039--15143
7
14.7
7
71
8
61
17
3
1
77
1.01
15039--15143
19
6.2
16
75
17
72
17
3
1
77
1.01
15074--15143
26
2.7
27
72
16
67
15
5
2
75
1.11
10087--22053
711
16.8
717
91
7
18375
17
10
4
67
1.37
15753--15853
7
13.7
7
68
11
51
14
5
2
76
1.10
15966--16038
19
3.8
19
71
15
62
10
12
5
71
1.30
16455--16511
22
2.5
22
80
2
69
14
3
1
80
0.92
16456--16511
7
7.6
7
82
11
67
14
3
1
80
0.93
16495--16558
16
3.6
18
78
18
62
14
6
3
76
1.10
17166--17235
24
2.8
26
80
8
74
17
4
1
77
1.01
17168--17231
29
2.2
29
78
10
69
18
3
1
76
1.00
17700--17768
31
2.2
31
80
10
77
11
11
5
71
1.31
17877--17924
7
6.6
7
79
9
51
14
4
2
79
0.98
17876--17919
15
2.9
15
79
3
52
15
4
0
79
0.89
18555--18607
24
2.2
25
83
10
65
15
5
3
75
1.13
18564--18616
24
2.3
23
81
12
63
16
3
1
77
1.01
18629--18668
16
2.6
15
84
7
53
12
10
0
77
0.99
18654--18741
19
4.3
20
71
11
54
17
6
5
70
1.29
19273--19331
30
2.0
30
83
3
75
15
5
1
77
1.01
19281--19382
30
3.4
29
76
10
91
14
6
1
76
1.08
21946--22018
32
2.3
32
79
9
85
10
10
8
69
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24036--24088
26
2.0
26
100
0
106
26
20
26
26
1.99
24919--24967
25
2.0
25
88
8
73
30
18
24
26
1.98

Tables:   1

The End!