Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168253.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_484, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25331

Tables:   1   

This is table  1  of  1  ( 66 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
125--162
19
2.0
20
89
5
60
47
2
5
44
1.39
845--907
27
2.3
28
83
2
83
57
0
0
42
0.99
1951--1988
15
2.4
16
91
4
60
44
5
5
44
1.49
2080--2141
21
3.1
20
84
11
74
54
0
0
45
0.99
2094--2141
10
4.6
10
87
7
60
56
0
0
43
0.99
2241--2669
179
2.4
180
76
9
446
38
9
10
41
1.71
2695--2741
18
2.7
18
80
12
62
40
10
4
44
1.59
2700--3339
178
3.6
178
75
9
566
37
10
9
42
1.72
3386--4755
181
7.6
180
79
4
1248
41
10
7
40
1.68
4723--4797
36
2.1
36
94
0
132
50
5
5
38
1.48
5835--5889
18
3.1
18
75
15
60
47
0
3
49
1.19
8405--8457
21
2.5
22
73
14
58
37
3
0
58
1.16
8443--8484
22
2.0
20
82
17
50
54
2
2
40
1.26
8610--8639
14
2.1
14
93
0
51
46
0
0
53
1.00
8752--8800
18
2.5
20
77
19
57
40
4
0
55
1.19
9052--9102
17
2.9
17
88
5
66
52
0
0
47
1.00
9050--9112
9
7.1
9
77
13
60
50
1
0
47
1.10
9060--9112
17
3.2
17
82
17
67
50
1
0
47
1.12
9085--9165
31
2.8
29
76
9
69
44
4
3
46
1.42
9116--9154
19
2.1
19
85
9
53
46
2
2
48
1.29
9422--10203
181
4.3
180
80
5
801
41
8
9
41
1.67
9422--10243
361
2.3
362
81
4
960
40
8
9
40
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9422--10243
180
4.5
180
79
4
807
40
8
9
40
1.68
10253--11522
180
7.1
177
75
9
833
40
7
10
41
1.69
10292--11478
356
3.3
358
77
8
908
40
7
10
41
1.69
10245--11510
176
7.1
176
75
9
894
40
7
10
41
1.69
11589--12607
177
5.7
177
76
7
737
38
8
10
42
1.69
12590--12625
18
2.0
18
100
0
72
38
0
0
61
0.96
11589--12603
357
2.8
353
74
9
905
38
8
10
42
1.69
13058--13097
22
1.9
20
85
10
53
40
0
2
57
1.12
13118--13151
16
2.1
16
94
0
59
52
0
0
47
1.00
13277--13373
47
2.2
47
83
10
125
44
3
2
50
1.29
13518--13575
28
2.1
28
81
12
66
51
1
1
44
1.21
13590--13658
15
4.5
15
76
18
63
56
0
0
43
0.99
13608--13763
12
11.3
13
68
25
65
51
1
0
46
1.08
13650--13780
25
5.2
26
72
24
79
49
1
0
48
1.10
13587--13794
47
4.2
48
74
20
130
51
0
0
46
1.11
13602--13793
61
3.2
60
70
18
145
51
1
0
46
1.11
14186--14215
14
2.1
15
93
6
53
40
0
0
60
0.97
14665--14719
26
2.2
24
81
15
58
49
3
1
45
1.30
14675--14736
26
2.3
27
84
15
76
48
1
0
50
1.10
15307--15359
19
2.8
20
73
23
60
43
1
0
54
1.11
16026--16068
22
2.0
20
86
8
59
51
0
0
48
1.00
17099--17131
13
2.5
13
85
14
50
42
0
6
51
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17099--17158
25
2.4
25
83
8
68
43
0
3
53
1.17
17126--17160
18
1.9
18
94
0
61
45
0
0
54
0.99
17422--17446
13
1.9
13
100
0
50
52
0
8
40
1.31
17942--18030
21
4.3
19
72
17
70
49
1
2
47
1.21
18503--19492
535
1.8
536
80
6
1193
41
9
7
41
1.66
18207--19919
180
9.6
181
74
9
1079
41
9
7
40
1.66
18449--19725
715
1.8
712
79
7
1461
41
9
7
41
1.66
20417--20493
19
4.3
19
75
18
58
53
3
0
42
1.19
20443--20490
24
2.0
24
88
8
71
50
2
0
47
1.12
20703--20739
14
2.7
15
84
16
53
45
0
0
54
1.00
20703--20744
17
2.7
15
85
10
50
50
0
0
50
1.00
20715--20753
17
2.3
17
86
0
51
51
2
0
46
1.14
21438--21501
24
2.6
24
82
7
76
50
1
1
46
1.20
21582--21629
16
3.3
14
78
18
53
60
4
2
33
1.27
21650--21674
8
3.1
8
100
0
50
64
0
0
36
0.94
22476--23262
180
4.4
181
80
4
783
41
8
9
40
1.69
22476--23254
361
2.2
355
80
6
856
40
8
9
40
1.68
24175--24231
15
3.7
15
72
23
55
35
1
5
57
1.31
24183--24236
19
3.2
18
75
24
64
35
1
5
57
1.33
24246--24305
22
2.6
22
82
12
68
48
1
1
48
1.21
24247--24293
21
2.2
21
84
3
67
51
2
0
46
1.13
25112--25162
10
4.9
10
73
17
50
49
0
1
49
1.12

Tables:   1

The End!