Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168326.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_55, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  150338

Tables:   1   2   

This is table  2  of  2  ( 205 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92276--92337
22
2.9
21
80
7
70
3
11
4
80
0.98
93558--93834
120
2.3
120
84
7
347
36
12
6
44
1.68
93558--93832
59
4.7
58
83
8
326
37
13
6
43
1.69
93904--93937
9
3.7
9
92
4
50
61
0
0
38
0.96
93958--93982
13
1.9
13
100
0
50
16
32
32
20
1.94
94461--94513
27
2.0
26
85
3
70
62
13
0
24
1.31
94833--94892
19
3.2
17
76
19
50
68
0
6
25
1.14
94810--94925
42
2.8
38
80
10
106
65
0
5
29
1.14
94810--94922
38
2.8
40
82
9
113
65
0
5
29
1.14
94850--95109
7
36.7
7
67
21
66
65
3
2
28
1.21
94842--95002
18
8.4
19
72
21
113
62
1
3
33
1.19
94873--94999
59
2.2
58
78
13
140
61
1
2
34
1.18
94898--95028
59
2.2
59
82
5
158
61
3
2
32
1.23
94883--95036
35
4.6
35
81
10
155
61
2
2
33
1.24
94888--95003
10
11.8
10
69
22
52
60
1
1
36
1.17
95046--95142
7
14.0
7
73
11
67
76
4
2
17
1.04
95081--95142
13
4.8
13
78
13
74
80
1
1
16
0.87
95080--95142
7
9.6
7
81
10
71
80
1
1
15
0.86
95082--95143
25
2.5
25
79
12
74
79
1
1
17
0.90
95321--95615
42
6.9
43
79
14
267
40
20
14
24
1.90
95316--95575
45
5.9
46
76
16
234
41
20
14
24
1.89
95321--95598
87
3.2
86
83
11
331
39
20
15
24
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96639--96668
15
2.0
15
93
0
51
16
3
0
80
0.85
106568--106845
60
4.7
59
87
6
393
35
13
7
43
1.71
106568--106867
119
2.5
119
85
8
409
37
12
7
43
1.69
106862--106949
5
17.0
5
82
10
88
73
1
1
23
0.96
106878--107004
6
20.2
6
72
18
55
71
1
1
25
1.03
106862--106949
11
7.9
11
79
8
72
73
1
1
23
0.96
106908--107007
26
4.0
26
71
16
86
72
2
1
25
1.02
107866--107985
42
2.9
41
78
7
107
64
0
5
29
1.23
107866--107981
20
5.6
20
74
9
97
63
0
6
29
1.24
107935--108153
14
16.4
14
65
21
71
63
2
3
31
1.23
107948--108160
8
26.8
8
70
18
99
63
2
2
31
1.21
107927--108049
11
12.1
10
66
22
53
61
1
3
33
1.21
107925--108062
42
3.5
41
80
18
143
61
1
3
33
1.22
107963--108066
35
3.0
35
85
4
131
61
1
2
33
1.22
107914--108093
49
3.8
48
73
13
140
61
2
3
32
1.24
107969--108119
35
4.5
33
79
10
112
62
2
2
32
1.23
108129--108191
6
9.7
7
81
13
73
73
1
1
23
1.01
108130--108189
19
3.2
18
84
11
75
73
1
1
23
1.01
108068--108191
50
2.4
51
81
10
130
69
2
3
25
1.16
108116--108191
32
2.4
30
82
10
82
72
2
2
22
1.10
108100--108191
20
4.8
19
73
15
73
71
3
2
22
1.11
111690--111728
2
19.5
2
100
0
78
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115938--116018
25
3.3
24
76
8
65
39
7
33
19
1.80
116278--116306
11
2.6
11
100
0
58
20
0
27
51
1.47
116333--116489
52
3.0
52
85
9
180
41
8
23
26
1.83
117924--117963
21
2.0
21
85
14
57
37
2
2
57
1.26
118094--118127
17
2.0
17
88
11
52
61
0
0
38
0.96
121136--121174
13
3.1
13
81
3
53
48
0
0
51
1.00
132789--132841
3
17.7
3
92
7
90
32
1
0
66
1.03
134364--134423
17
3.6
16
80
6
66
0
15
3
81
0.81
134366--134395
12
2.6
12
94
5
53
0
6
6
86
0.70
135121--135159
12
3.2
12
92
0
60
69
7
7
15
1.35
135189--135539
57
6.0
59
86
6
482
34
12
8
45
1.72
135301--135391
30
3.1
30
62
25
77
35
13
8
42
1.75
135189--135537
118
3.0
115
89
5
506
34
12
8
45
1.72
135547--135688
16
8.9
15
69
21
85
73
3
3
19
1.13
135560--135629
5
13.6
5
77
19
65
78
1
4
15
0.98
135554--135630
6
13.3
6
76
14
65
77
1
3
16
0.98
135547--135630
30
2.7
29
83
10
87
77
1
4
16
1.00
135583--135677
11
8.5
11
71
20
56
72
4
2
21
1.12
136711--136808
38
2.5
40
81
12
116
64
6
0
29
1.18
136774--136840
3
22.7
3
77
17
52
70
4
1
23
1.14
136775--136835
21
2.9
21
79
16
63
72
4
1
21
1.13
137003--137076
1
74.0
1
78
0
76
2
1
6
89
0.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
137003--137075
28
2.6
28
91
2
112
2
1
6
89
0.64
137003--137075
19
3.9
19
82
13
89
2
1
6
89
0.64
137087--137298
42
5.0
41
87
8
261
36
20
18
24
1.95
137087--137298
83
2.5
82
83
11
270
36
20
18
24
1.95
137526--137592
3
23.7
3
80
17
56
23
1
2
71
1.08
137608--137683
29
2.7
29
80
11
86
31
0
5
63
1.17
138362--138405
16
2.6
17
82
3
54
50
0
50
0
1.00
138650--138778
9
13.4
9
68
16
64
17
1
3
77
0.99
138650--138778
13
9.9
12
66
20
55
17
1
3
77
0.99
138717--138781
5
13.4
5
73
23
59
16
1
1
80
0.88
138650--138796
23
6.0
25
70
22
82
17
2
3
76
1.05
138748--138796
21
2.3
21
86
10
64
18
4
0
77
0.92
138807--139132
56
5.9
55
92
5
532
46
7
10
35
1.66
138807--139132
164
2.0
169
94
4
583
46
7
10
35
1.66
139164--139202
12
3.2
12
92
0
60
15
7
7
69
1.35
144344--144768
42
10.1
42
83
8
483
24
16
21
37
1.93
144344--144768
84
5.1
84
86
5
576
24
16
21
37
1.93
144344--144768
126
3.4
124
85
8
556
24
16
21
37
1.93
144775--144811
8
4.6
8
93
6
58
86
10
2
0
0.67

Tables:   1   2

The End!