Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168339.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_561, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22953

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44--447
177
2.3
178
80
4
447
40
8
9
41
1.69
985--1503
178
2.9
179
78
7
401
39
8
9
42
1.68
17--1687
181
9.3
179
70
12
700
39
8
10
41
1.70
1744--2244
181
2.8
173
78
8
449
42
10
6
40
1.65
2170--2336
84
2.0
84
97
0
316
33
8
8
49
1.64
2256--6518
181
23.8
180
77
6
3081
41
9
8
40
1.69
2256--22809
542
38.5
536
71
12
7329
41
9
8
40
1.68
7057--15929
181
49.6
181
75
7
5681
41
10
8
40
1.68
7062--21825
358
41.4
357
73
10
3691
41
9
8
40
1.68
7879--7922
23
2.0
22
86
4
61
61
0
2
36
1.09
8221--8871
361
1.8
361
81
4
830
43
9
9
38
1.68
10614--10925
169
1.8
168
86
4
448
43
10
6
39
1.65
11657--11712
18
3.1
20
73
23
61
41
14
5
39
1.68
10614--22953
357
34.6
357
74
9
7282
41
9
8
40
1.68
10648--22953
537
23.0
537
73
10
6405
41
9
8
40
1.68
16691--22813
181
34.3
179
73
11
3070
41
9
8
40
1.67
17679--19712
719
2.8
710
78
6
1589
42
9
8
39
1.66
18131--21005
176
16.1
176
72
13
523
42
9
7
40
1.66
20670--21005
175
1.9
175
82
7
414
41
8
7
43
1.61
21067--21387
163
2.0
163
83
4
414
41
9
8
40
1.68

Tables:   1

The End!