Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168342.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_564, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22873

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
574--724
75
2.0
74
96
3
277
47
7
5
39
1.55
672--4129
181
19.3
180
76
7
2496
41
10
8
39
1.70
1486--1520
18
1.9
18
88
0
52
40
11
14
34
1.82
648--4129
540
6.5
538
77
7
2745
41
10
8
39
1.70
672--4129
361
9.6
354
75
9
2338
41
10
8
39
1.70
4668--9319
181
26.1
180
75
8
2979
42
9
8
39
1.68
5490--5533
23
2.0
22
86
4
61
61
0
2
36
1.09
6900--22864
543
29.9
531
71
12
5040
41
9
8
40
1.68
9685--9919
125
1.9
125
82
0
301
45
8
8
38
1.63
9820--10604
358
2.2
359
80
5
874
42
9
7
40
1.66
10026--10886
176
4.8
175
75
11
477
42
9
7
40
1.65
10921--22871
181
66.7
179
72
11
4539
41
9
8
40
1.69
10921--22864
362
33.3
358
72
10
5589
41
9
8
40
1.69
12352--12391
19
2.0
21
85
9
57
62
2
5
30
1.29
10026--17869
720
11.0
709
73
11
1958
41
9
8
40
1.68
13831--13886
18
3.1
20
73
23
61
41
14
5
39
1.68
18211--22728
906
5.0
890
76
10
2979
42
9
8
40
1.67

Tables:   1

The End!