Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168343.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22836

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2084--2122
20
2.0
20
89
0
60
66
0
23
10
1.22
2109--2149
13
3.2
12
83
10
55
82
2
14
0
0.76
2108--2153
16
2.9
15
81
18
58
82
2
15
0
0.76
2109--2169
25
2.2
26
83
13
70
78
1
16
3
0.96
3383--3518
42
3.3
42
91
3
222
22
19
22
35
1.96
3492--3544
26
2.0
26
96
0
97
20
15
28
35
1.93
3518--3659
41
3.5
41
87
0
194
23
15
25
35
1.94
3450--3585
67
2.0
68
94
1
238
22
16
25
36
1.94
3670--3726
1
57.0
1
82
0
69
91
8
0
0
0.43
3669--3726
26
2.3
26
90
3
91
89
10
0
0
0.48
3928--3975
3
16.0
3
83
16
64
29
0
2
68
1.01
4016--4059
19
2.3
18
82
17
54
36
0
2
61
1.09
4608--4646
11
3.5
11
82
0
51
17
23
30
28
1.97
4638--4688
20
2.5
20
80
0
66
43
23
19
13
1.87
5029--5053
10
2.5
10
100
0
50
16
0
8
76
1.02
5098--5137
17
2.4
16
84
8
53
22
5
0
72
1.04
5124--5174
17
2.9
18
78
21
63
13
3
1
80
0.94
5189--5539
117
3.0
115
90
4
537
44
9
12
33
1.74
5189--5536
59
6.0
58
89
3
515
44
9
12
33
1.74
6857--6909
26
2.0
26
100
0
106
26
20
26
26
1.99
7126--8502
714
1.9
705
82
8
1697
26
22
23
27
1.99
9371--9423
26
2.0
26
100
0
106
26
20
26
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10251--10302
25
2.0
26
92
3
88
28
21
23
26
1.99
7750--12269
882
5.1
884
84
6
5329
24
23
24
26
2.00
13404--13456
26
2.0
26
96
0
97
26
16
28
28
1.97
14321--14373
26
2.0
26
96
0
97
26
18
26
28
1.98
14502--15962
715
2.0
715
87
5
2078
26
23
23
26
2.00
15938--15988
26
2.0
26
92
0
84
31
15
23
29
1.95
16369--16424
26
2.2
26
96
0
103
30
17
21
30
1.96
17098--17150
26
2.0
26
92
0
88
30
20
22
26
1.98
17996--18048
26
2.0
26
85
0
70
28
15
26
30
1.96
16395--22835
887
7.3
886
83
6
7693
25
23
24
26
2.00
18880--18932
26
2.0
26
96
0
97
28
20
24
26
1.99
20632--20684
26
2.0
26
92
0
88
26
18
24
30
1.98
21483--21535
26
2.0
26
92
0
88
22
20
28
28
1.99
22352--22404
26
2.0
26
96
0
97
26
18
26
28
1.98

Tables:   1

The End!