Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168344.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_566, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22809

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1567--1651
42
2.0
44
81
4
102
47
22
3
27
1.68
1906--1946
20
2.0
20
95
0
73
34
12
9
43
1.75
5203--5242
18
2.2
18
86
0
53
85
10
5
0
0.75
6587--6671
15
5.7
15
71
8
57
48
29
1
21
1.58
6585--6690
44
2.4
44
84
3
133
48
28
0
22
1.57
6600--6677
15
5.3
15
75
9
61
48
25
1
24
1.59
6626--6686
30
2.1
29
84
3
77
45
32
1
19
1.60
6768--6808
15
2.9
14
89
7
64
51
36
0
12
1.40
6587--6808
14
15.2
14
66
14
83
48
30
0
20
1.56
6768--6821
14
3.8
14
85
4
54
51
33
1
12
1.51
6701--6879
88
2.0
87
82
5
218
48
29
1
21
1.60
6768--7081
29
10.9
29
71
9
119
46
31
1
20
1.60
6969--7072
28
3.7
28
78
5
84
49
28
0
21
1.56
7028--7079
14
3.7
14
72
10
52
55
28
0
15
1.40
13573--13609
19
1.9
19
89
10
58
86
2
5
5
0.78
15341--15445
41
2.6
41
89
3
149
37
19
14
29
1.91
15728--15796
22
3.1
22
71
8
68
34
27
13
24
1.92
16204--16247
22
2.0
22
86
0
61
27
20
15
36
1.93
16313--16355
22
2.0
21
90
4
68
23
16
20
39
1.92
15909--16673
219
3.5
219
80
4
767
23
20
16
39
1.92
16423--16466
22
2.0
22
90
0
70
31
18
13
36
1.90
15910--16673
329
2.3
326
81
4
867
23
20
16
39
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16533--16575
22
2.0
22
90
0
68
30
20
16
32
1.95
15910--16612
110
6.4
109
80
4
682
22
20
16
40
1.91
15893--16687
110
7.3
109
78
6
567
23
20
16
39
1.92
16636--16685
23
2.2
23
92
0
82
28
22
20
30
1.98
16647--16725
22
3.5
22
84
8
106
27
24
17
30
1.97
16808--16850
22
2.0
22
86
9
61
30
23
18
27
1.98
17111--17154
16
2.7
16
85
3
52
84
6
4
4
0.88
18525--18566
9
4.7
9
91
5
59
21
0
9
69
1.17
18525--18578
19
2.9
19
83
10
67
24
0
9
66
1.20
19004--19057
25
2.2
24
83
6
63
35
5
18
40
1.74
19197--19234
20
1.9
20
94
0
67
31
26
18
23
1.97
19553--19600
25
1.9
25
82
0
60
6
6
6
81
0.99
19698--20157
116
3.9
118
90
5
639
43
7
14
34
1.74
19698--20157
57
7.7
61
82
10
496
43
7
14
34
1.74

Tables:   1

The End!