Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168354.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_575, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22600

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93--1542
164
8.5
165
73
17
758
41
8
7
41
1.64
1379--1677
149
2.0
147
84
7
385
39
10
7
43
1.66
2686--4935
182
12.4
177
72
10
1300
41
10
8
39
1.70
2772--7574
362
13.2
359
70
14
1515
41
10
8
39
1.71
2969--4916
543
3.6
533
79
8
1549
42
10
8
39
1.69
4878--5012
66
2.1
65
90
4
209
34
14
6
44
1.71
4353--5546
600
2.0
601
79
7
1309
41
10
7
40
1.68
4949--5689
359
2.1
355
81
5
843
41
10
8
40
1.70
4943--7664
180
15.2
175
71
13
1086
40
10
9
39
1.72
7176--7520
182
1.9
179
80
7
392
42
10
9
37
1.72
8176--9462
181
7.1
181
79
4
1153
40
9
8
41
1.68
8966--9016
17
2.8
19
68
14
54
39
5
9
45
1.62
8177--9462
363
3.6
359
78
7
1226
40
9
8
41
1.68
8176--9457
544
2.4
539
81
5
1395
40
9
8
41
1.68
10047--10873
179
4.6
179
75
9
681
42
9
6
41
1.63
10091--10791
348
2.0
352
81
6
814
42
8
7
40
1.64
12945--13705
180
4.3
177
75
9
530
39
9
9
41
1.69
13863--14122
140
1.8
142
85
6
368
38
6
10
45
1.64
20685--20714
9
3.2
9
95
4
51
63
3
0
33
1.11

Tables:   1

The End!