Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168383.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_600, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21833

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--2369
352
6.8
353
72
13
1108
40
8
9
41
1.68
4--771
176
4.3
179
77
9
750
39
7
9
43
1.66
1181--2373
177
6.7
180
78
7
1116
41
8
10
40
1.70
2519--2852
181
1.8
182
80
6
401
40
9
11
38
1.74
2475--3847
179
7.6
180
74
7
874
39
8
10
41
1.70
3421--3753
185
1.8
182
81
11
410
40
8
9
41
1.68
3874--4564
178
3.9
176
75
10
527
39
9
9
42
1.69
4618--6041
181
8.0
179
78
6
1291
41
10
8
40
1.69
4648--6041
177
7.8
172
76
10
887
41
10
8
40
1.69
4608--6041
354
4.0
354
78
7
1371
41
10
8
40
1.69
5916--6174
137
1.9
137
82
4
326
42
11
5
40
1.65
6048--17138
181
62.1
179
74
9
6760
41
9
8
40
1.68
6466--6878
173
2.5
165
81
9
444
43
11
5
38
1.66
9795--9830
16
2.1
17
90
10
56
41
5
8
44
1.58
6048--17134
540
20.7
539
74
9
6430
41
9
8
40
1.68
11609--12284
169
3.9
167
74
10
424
42
10
7
39
1.68
6563--17138
360
29.6
360
75
8
6742
41
9
8
40
1.68
14361--14392
16
1.9
17
93
6
57
43
6
6
43
1.54
14807--15130
167
1.9
171
84
5
435
43
8
6
40
1.62
15848--15903
18
3.1
20
73
23
61
41
14
5
39
1.68
13320--17122
531
7.1
537
74
10
1546
41
9
8
40
1.68
14972--17138
182
12.1
181
75
7
1484
41
10
8
40
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15773--17100
177
7.4
179
74
9
602
41
9
8
40
1.67
17559--17597
20
2.0
20
84
0
51
23
10
25
41
1.86

Tables:   1

The End!