Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168396.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_612, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21542

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1001
181
5.6
180
76
7
847
39
7
10
42
1.69
54--1001
356
2.6
357
78
8
949
39
8
10
42
1.68
1535--6445
180
27.0
180
70
12
2238
40
8
10
41
1.69
3392--3440
17
2.8
18
78
15
66
46
0
10
42
1.37
3399--3823
181
2.4
180
79
4
450
39
7
10
42
1.67
3391--4297
472
1.9
466
81
4
1090
39
8
10
41
1.70
3914--6449
539
4.7
528
76
9
1850
39
8
10
41
1.69
3865--6449
359
7.2
360
76
7
2048
39
8
10
41
1.70
8635--8674
20
2.0
20
85
9
55
50
0
12
37
1.41
14342--17082
181
15.2
180
75
6
1972
39
8
9
41
1.69
14342--17079
361
7.6
360
75
7
2059
39
8
9
41
1.69
16971--17199
118
1.9
118
82
5
284
40
6
10
42
1.64
17083--20911
181
21.4
180
74
9
2374
39
8
10
41
1.71
18821--18858
20
1.9
20
84
10
51
55
5
7
31
1.51

Tables:   1

The End!