Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168399.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21481

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5551--5578
11
2.5
11
100
0
56
14
0
7
78
0.95
6339--6406
30
2.3
30
84
0
82
33
17
1
47
1.57
8324--8438
20
5.2
23
67
18
66
31
0
6
62
1.19
8413--8474
25
2.3
26
81
13
72
33
0
3
62
1.11
8894--8966
31
2.4
31
88
4
103
23
26
23
27
2.00
9026--9065
19
2.0
20
90
4
64
27
20
20
32
1.97
9290--9332
5
8.6
5
89
0
68
23
41
34
0
1.55
9420--10026
152
3.9
153
93
2
984
29
14
17
38
1.89
13683--13729
8
5.9
8
80
9
51
80
0
14
4
0.85
14956--15578
42
15.0
42
92
3
946
21
17
24
35
1.95
15585--15647
12
5.2
12
90
9
94
92
7
0
0
0.40
15585--15647
1
63.0
1
83
0
81
92
7
0
0
0.40
15987--16020
3
11.7
3
93
6
61
29
0
0
70
0.87
16444--16516
31
2.4
31
86
4
103
21
24
24
28
1.99
16823--16875
5
10.6
5
91
0
88
22
41
35
0
1.54
16895--16919
1
25.0
1
100
0
50
0
0
0
100
0.00
16965--17422
160
2.9
154
91
4
731
29
14
17
38
1.90
16965--17416
152
2.9
153
92
2
726
29
14
17
38
1.90

Tables:   1

The End!