Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168402.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_618, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21422

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--418
164
2.0
168
80
5
377
40
9
7
42
1.66
457--802
185
1.8
186
82
7
441
42
8
8
40
1.67
879--1127
133
1.9
133
88
1
374
39
8
8
43
1.66
1010--4947
181
22.2
180
71
11
1437
40
8
9
41
1.67
1082--2456
528
2.6
525
77
8
1265
41
8
9
41
1.67
2794--3077
144
1.9
148
80
12
336
36
6
10
46
1.64
2935--4966
181
11.3
181
77
6
1729
41
8
9
41
1.66
2935--11517
362
23.6
359
70
12
3183
40
8
9
41
1.68
5133--5614
180
2.7
180
81
5
530
39
7
10
42
1.68
5812--6192
180
2.2
178
82
7
454
42
7
8
40
1.65
6487--6511
11
2.3
11
100
0
50
52
0
0
48
1.00
6985--8477
754
2.0
776
83
6
1918
40
9
9
39
1.71
7732--11517
181
21.1
180
77
6
3054
40
8
9
40
1.68
10744--10799
18
3.2
18
75
12
62
53
7
1
37
1.39
11416--11637
120
1.9
120
83
7
299
46
7
12
33
1.70
10936--12185
666
1.9
659
82
5
1570
40
9
10
39
1.72
12142--12188
19
2.7
18
74
12
53
42
4
12
40
1.63
12534--16260
181
20.8
180
75
8
2527
40
10
8
40
1.70
12616--16058
533
6.4
538
72
11
1247
40
10
8
40
1.70
13449--14110
180
3.7
171
77
7
425
41
10
7
40
1.69
14226--14561
186
1.8
186
80
7
405
38
10
9
41
1.72
16465--16497
18
1.9
17
88
11
50
39
6
6
48
1.53

Tables:   1

The End!