Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168428.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_641, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20911

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
682--722
20
2.0
20
95
0
73
58
0
14
26
1.37
1830--1865
16
2.1
17
90
10
56
44
5
5
44
1.50
852--7140
181
35.2
181
75
8
4142
41
10
8
40
1.68
856--15706
361
41.4
358
69
13
4894
41
10
8
40
1.69
7182--15707
181
47.3
180
73
9
4580
41
10
8
39
1.69
7182--11551
542
8.1
538
75
7
2466
41
10
8
40
1.69
4955--15684
718
14.9
714
72
11
4032
41
10
8
40
1.69
14060--15059
521
1.9
516
83
4
1205
42
9
7
40
1.67
12083--15639
358
10.0
351
74
10
2162
41
10
7
39
1.69
15151--15187
18
2.0
19
89
5
58
35
10
8
45
1.69
15198--15627
182
2.5
171
77
9
436
42
9
8
38
1.69
17829--18940
182
6.1
179
74
9
623
40
9
8
40
1.69
18329--18374
23
2.0
24
86
4
67
36
8
6
47
1.60
18329--18374
24
2.0
23
86
4
65
36
8
6
47
1.60
18776--19061
155
1.9
155
86
3
416
39
10
7
43
1.66
18931--19948
181
5.6
180
76
8
821
40
10
7
41
1.68
19837--20124
146
2.0
147
88
2
436
34
10
14
40
1.79

Tables:   1

The End!