Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168435.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_648, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20662

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
776--808
17
1.9
17
100
0
66
66
6
9
18
1.40
820--1746
177
5.2
177
77
7
720
39
8
10
40
1.71
1610--1879
133
2.0
133
82
4
330
42
7
10
39
1.67
1743--4526
179
15.5
180
75
7
1877
40
7
9
42
1.66
4688--4739
27
1.9
27
92
0
86
42
7
13
36
1.73
4968--8325
181
18.7
180
76
6
2421
41
9
8
40
1.68
8773--10236
180
8.2
180
75
6
1060
41
9
9
39
1.70
8773--10236
541
2.7
531
82
6
1675
41
9
9
39
1.70
10196--10332
67
2.0
67
85
0
184
38
11
8
40
1.73
9767--10870
604
1.8
602
79
7
1272
41
9
7
41
1.65
10326--10927
176
3.4
178
76
10
532
43
8
5
42
1.60
11451--11497
18
2.4
20
82
10
53
46
12
4
36
1.62
10958--12626
718
2.3
723
80
7
1783
40
8
8
42
1.68
10957--17116
181
34.5
180
74
9
3743
40
8
9
40
1.68
13070--13386
166
1.9
165
81
7
383
41
6
8
43
1.62
14514--14830
169
1.9
169
81
7
394
41
8
10
39
1.70
15229--15270
19
2.2
19
80
20
52
35
4
2
57
1.33
15287--15329
20
2.2
19
84
16
52
51
9
11
27
1.69
10954--17116
360
17.3
355
73
9
2903
40
8
9
40
1.68
17129--20646
181
19.7
176
73
11
1998
40
8
9
41
1.67
17129--20646
358
9.9
360
74
10
2177
40
8
9
41
1.67

Tables:   1

The End!