Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168460.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_670, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18493

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
617--669
26
2.0
26
92
0
88
26
20
24
28
1.99
1517--1569
26
2.0
26
92
0
88
28
22
22
26
1.99
1--2099
900
2.3
898
87
2
3032
26
22
22
28
1.99
2447--4680
902
2.5
886
87
4
3103
25
23
23
27
2.00
4083--4135
26
2.0
26
88
0
79
28
20
22
28
1.99
4716--4768
26
2.0
26
92
0
88
28
22
22
26
1.99
9435--9488
17
3.2
16
82
10
63
18
0
29
51
1.46
11079--11131
26
2.0
26
92
0
88
28
20
24
26
1.99
11970--12019
26
1.9
26
91
0
82
26
24
26
24
2.00
12863--12915
26
2.0
26
96
0
97
26
22
24
26
2.00
10919--13835
893
3.3
886
88
3
4211
25
25
23
25
2.00
13746--13796
26
2.0
26
84
0
66
31
19
19
29
1.97
15356--15405
26
1.9
26
91
0
82
26
22
24
28
1.99
14591--16069
750
2.0
749
89
2
2254
26
21
24
27
1.99
16234--16284
26
2.0
26
88
0
75
25
21
23
29
1.99
15474--18493
852
3.5
837
79
10
3110
25
23
23
26
2.00

Tables:   1

The End!