Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168499.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_96, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90779

Tables:   1   2   

This is table  1  of  2  ( 209 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3019--3197
58
3.1
57
91
2
277
36
10
6
46
1.64
3092--3187
29
3.3
29
66
27
76
37
13
6
42
1.70
3225--3281
11
5.2
11
75
12
55
77
0
7
15
0.98
3217--3281
6
12.4
5
76
15
53
76
0
6
16
0.97
3245--3274
15
1.9
15
93
6
51
76
0
10
13
1.01
3220--3280
21
2.9
21
86
11
81
77
0
6
16
0.98
3307--3339
17
1.9
17
88
11
50
72
0
0
27
0.85
4131--4169
18
2.2
18
90
0
60
61
5
5
28
1.39
4159--4304
8
20.7
7
70
18
67
66
3
3
26
1.23
4173--4265
4
23.2
4
68
12
57
64
4
3
27
1.28
4113--4256
18
8.1
18
69
11
57
63
4
4
28
1.32
4242--4302
22
2.8
20
78
7
59
70
1
3
24
1.11
4667--4718
8
6.5
8
78
12
54
82
1
5
9
0.90
4699--4811
54
2.2
48
80
13
122
71
5
2
20
1.18
4762--4814
25
2.1
25
82
10
63
75
3
1
18
1.05
4744--4828
43
2.0
44
81
11
104
74
4
4
16
1.16
4825--4886
22
2.6
24
78
14
67
72
8
8
11
1.28
4970--5031
23
2.7
24
83
11
69
72
4
8
14
1.24
5477--5528
18
2.9
18
82
0
59
75
1
3
19
1.06
6070--6112
21
2.2
19
87
8
59
76
0
9
13
1.01
6064--6117
27
2.1
25
86
10
74
77
0
9
12
0.98
6029--6115
31
2.8
31
73
15
88
74
1
10
13
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6167--6241
9
8.7
9
83
14
79
76
2
9
12
1.13
6296--6345
15
3.2
16
83
11
50
72
2
10
16
1.21
6853--6957
9
13.6
7
69
18
50
75
0
8
15
1.09
6853--6920
21
3.5
19
75
14
68
77
1
4
16
0.99
7294--7345
17
3.0
17
81
13
61
69
5
7
17
1.33
7294--7327
18
1.9
17
88
5
50
73
5
2
17
1.16
7542--7576
16
2.1
18
89
10
56
65
0
0
34
0.93
7579--7631
15
3.3
15
82
10
52
73
0
9
16
1.08
7694--7742
25
2.1
25
85
11
68
77
4
4
14
1.06
7694--7767
28
2.6
29
77
14
82
77
4
5
13
1.10
7700--7767
29
2.4
29
80
9
86
77
4
5
11
1.08
7933--7997
11
5.6
11
76
16
53
80
3
1
15
0.92
7933--8001
24
2.9
23
78
8
77
79
2
2
14
0.96
7933--7994
6
10.5
6
74
10
56
80
3
1
14
0.91
7933--8004
17
4.1
16
72
19
56
80
2
2
13
0.93
7933--8099
47
3.5
47
74
12
126
74
5
7
12
1.21
8475--8519
17
2.5
17
83
16
56
71
4
4
20
1.21
8475--8518
18
2.4
18
81
7
54
72
4
4
18
1.19
8570--8666
48
2.0
48
80
7
108
73
5
7
14
1.23
8746--8786
7
5.9
7
100
0
82
73
12
0
14
1.11
8739--8793
21
2.5
21
82
5
74
74
9
0
16
1.06
10071--10122
17
3.0
17
81
13
61
69
5
7
17
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10061--10105
18
2.5
18
78
10
56
71
4
2
22
1.15
10347--10405
24
2.5
24
78
10
68
74
5
3
16
1.13
10470--10524
13
4.3
12
80
11
56
81
7
1
9
0.93
10470--10524
14
4.2
13
81
6
58
81
7
1
9
0.93
16342--16398
12
4.6
12
75
16
53
54
3
1
40
1.28
16628--16672
16
2.9
16
96
3
83
46
0
0
53
1.00
16853--16908
20
2.8
19
83
5
58
57
5
0
37
1.22
16984--17026
4
11.0
4
80
14
54
48
0
0
51
1.00
16963--17025
28
2.2
29
78
13
69
52
1
0
46
1.10
16984--17026
7
5.5
8
84
13
54
48
0
0
51
1.00
20238--20280
20
2.1
20
86
4
59
48
0
18
32
1.48
23011--23045
16
2.2
16
94
0
61
31
14
11
42
1.81
26095--26140
10
4.7
10
86
13
69
45
0
0
54
0.99
26064--26110
18
2.9
16
84
9
51
38
0
0
61
0.96
26095--26140
18
2.4
18
89
10
65
45
0
0
54
0.99
26607--26649
18
2.4
18
81
14
54
62
0
0
37
0.95
26731--26800
30
2.4
30
76
13
74
50
2
0
47
1.16
26788--26829
19
2.2
20
86
4
59
50
2
2
45
1.27
26883--26932
24
2.0
25
84
3
66
44
0
2
54
1.11
26895--26938
12
3.5
12
78
9
52
47
0
0
52
1.00
27107--27192
19
4.1
19
69
21
64
46
1
0
52
1.08
27441--27494
21
2.5
21
76
14
56
50
3
1
44
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27668--27736
32
2.0
34
86
10
97
43
2
2
50
1.32
27889--27961
16
4.6
16
75
11
62
46
4
0
49
1.21
27982--28094
35
3.1
35
81
12
122
48
0
1
49
1.11
28013--28071
28
2.1
30
84
9
79
52
0
0
47
1.00
28080--28110
3
10.3
3
92
0
53
35
0
0
64
0.94
28251--28292
17
2.5
17
78
14
52
38
7
2
52
1.42
28327--28386
15
3.9
16
71
6
52
41
3
1
53
1.27
28741--28819
31
2.5
33
78
17
87
55
1
0
43
1.07
28745--28819
15
4.8
16
74
15
68
56
1
0
42
1.08
29033--29123
14
6.6
14
67
20
57
50
2
1
46
1.20
29036--29122
24
3.8
23
68
20
65
50
2
1
45
1.21
29084--29124
5
8.6
5
80
20
52
60
0
0
39
0.96
29085--29124
9
4.8
9
76
17
50
60
0
0
40
0.97
29080--29137
24
2.5
23
74
17
66
58
0
1
39
1.08
29538--29588
24
2.2
22
86
6
66
49
1
0
49
1.12
29705--29764
25
2.4
26
74
20
65
58
0
0
41
0.98
29716--29766
18
2.8
18
74
11
50
60
0
0
39
0.97
30050--30085
6
6.2
6
90
6
56
63
0
0
36
0.94
30027--30071
21
2.1
21
84
8
56
60
2
0
37
1.09
30020--30085
17
3.6
17
75
18
62
57
1
0
40
1.08
30022--30098
6
12.8
6
78
20
54
54
1
0
44
1.08
30309--30340
13
2.5
13
94
0
55
56
0
0
43
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30588--30764
17
11.1
16
66
22
56
50
1
2
45
1.26
30677--30739
20
3.4
19
70
18
60
53
0
4
41
1.22
30728--30760
12
2.8
12
86
13
50
48
0
0
51
1.00
31019--31058
20
2.0
20
90
9
64
45
0
2
52
1.14
31301--31344
14
3.1
14
90
0
61
45
0
0
54
0.99
31297--31361
22
3.0
21
78
13
60
41
0
0
58
0.98
31309--31360
21
2.5
21
81
6
61
38
0
0
61
0.96
31309--31357
14
3.5
13
83
10
53
38
0
0
61
0.96
32257--32305
25
1.9
25
84
12
64
55
4
2
38
1.31
32643--32706
16
4.0
16
82
11
78
43
3
0
53
1.16
32643--32707
32
2.1
31
88
8
96
44
3
0
52
1.16
32991--33022
12
2.4
14
90
10
50
46
0
9
43
1.35
34584--34642
11
5.6
11
76
11
61
49
0
0
50
1.00
34581--34623
20
2.1
21
83
12
63
44
0
0
55
0.99
34688--34734
20
2.6
17
76
20
51
48
0
2
48
1.13
34872--34934
30
2.1
30
85
5
83
47
3
0
49
1.17
34879--34944
14
4.1
17
75
22
54
46
1
0
51
1.10
34885--34986
18
5.3
19
71
18
68
45
0
0
52
1.13
34895--34990
30
3.2
29
70
18
72
43
1
1
54
1.14
35048--35093
15
3.1
15
82
11
51
50
2
0
47
1.13
35063--35115
21
2.5
22
75
19
60
49
5
0
45
1.26
35233--35445
21
9.3
21
74
15
156
32
13
12
41
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35233--35453
46
4.8
46
90
0
343
32
13
11
42
1.80
35381--35420
14
3.1
14
72
20
50
35
12
10
42
1.76
35985--36080
51
1.9
49
83
8
122
29
10
7
53
1.62
36261--36291
16
1.9
16
93
0
53
22
0
0
77
0.77
36481--36516
12
3.2
12
88
11
58
44
0
0
55
0.99
38099--38199
19
5.0
19
71
16
60
48
2
1
46
1.28
38158--38190
9
3.5
10
92
8
52
42
0
0
57
0.98
38314--38380
23
3.0
22
77
16
66
59
2
2
34
1.28
38759--38796
20
1.9
20
94
0
67
44
0
7
47
1.32
38912--38961
17
3.2
17
86
13
72
54
0
0
46
1.00

Tables:   1   2