Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167899.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60230

Tables:   1   

This is table  1  of  1  ( 54 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
527--580
17
3.2
16
82
10
63
18
0
29
51
1.46
1960--1992
12
2.6
13
85
4
50
15
0
9
75
1.03
3074--3125
26
2.0
25
92
3
86
26
21
25
26
1.99
3944--3994
25
2.0
26
88
7
79
27
19
23
29
1.98
4825--4874
26
1.9
26
87
0
73
30
20
22
28
1.98
5722--5793
26
2.8
26
91
0
117
27
20
25
26
1.99
6628--6680
26
2.0
26
96
0
97
26
22
24
26
2.00
2050--9145
880
8.0
883
88
5
9931
25
25
24
25
2.00
9244--9301
26
2.2
26
90
0
98
31
18
24
25
1.98
10567--10624
26
2.2
26
93
0
98
29
18
25
25
1.98
12249--12282
11
2.9
12
95
4
61
17
38
26
17
1.92
12364--12416
26
2.0
26
88
0
79
30
20
24
24
1.99
13257--13306
26
1.9
26
95
0
91
28
24
24
24
2.00
14150--14201
26
2.0
26
85
3
70
26
19
23
30
1.98
9397--22385
899
14.6
895
86
4
16380
26
24
24
25
2.00
15944--15996
26
2.0
26
88
0
79
28
24
22
24
2.00
16821--16872
26
2.0
26
92
0
86
28
21
23
26
1.99
17705--17757
26
2.0
26
88
0
79
30
15
20
33
1.93
18605--18657
26
2.0
26
92
0
88
26
20
24
28
1.99
19504--19556
26
2.0
26
96
0
97
26
22
24
26
2.00
22151--22203
26
2.0
26
96
0
97
26
22
24
26
2.00
22397--22449
26
2.0
26
88
0
79
28
20
22
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29924--29976
26
2.0
26
88
0
79
28
24
20
26
1.99
30825--30877
26
2.0
26
92
0
88
26
24
22
26
2.00
29212--32482
901
3.6
896
86
3
4387
27
23
23
26
2.00
33788--33840
26
2.0
26
92
0
88
28
22
22
26
1.99
34688--34740
26
2.0
26
92
0
88
26
24
24
24
2.00
32831--34843
899
2.2
898
84
5
2615
26
24
23
25
2.00
34970--37472
878
2.8
881
85
5
3380
26
23
23
26
2.00
38202--38254
26
2.0
26
92
0
88
28
20
24
26
1.99
39099--39151
26
2.0
26
96
0
97
26
22
24
26
2.00
39754--39785
12
2.6
13
90
9
50
31
21
34
12
1.91
39193--41599
900
2.7
895
86
2
3207
27
22
22
27
1.99
42544--42609
17
3.9
16
73
9
51
19
3
27
50
1.63
42562--42615
17
3.2
16
76
10
54
16
0
29
53
1.43
43991--44032
13
3.1
13
83
10
57
14
0
9
76
1.02
43991--44033
15
3.1
14
86
6
61
13
0
9
76
1.01
44218--44437
86
2.6
87
87
1
309
39
19
21
20
1.93
44428--44489
23
2.7
23
90
2
90
30
17
24
27
1.97
44344--44701
131
2.7
132
82
6
431
36
18
22
22
1.95
44549--44614
23
3.0
22
80
4
71
28
19
24
27
1.99
44564--44620
23
2.5
23
86
8
73
29
19
22
28
1.98
44344--44707
132
2.8
132
82
6
384
36
18
21
22
1.95
45409--45685
33
8.5
33
81
7
280
35
15
18
29
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45409--45689
66
4.3
66
82
4
322
34
15
18
30
1.92
45685--45714
5
6.0
5
100
0
60
20
0
0
80
0.72
47757--47809
26
2.0
26
88
0
79
28
20
22
28
1.99
50372--50424
26
2.0
26
88
0
79
28
24
20
26
1.99
51468--51519
23
2.3
23
100
0
104
32
21
15
30
1.94
51180--53651
894
2.7
893
83
5
2939
26
23
22
27
2.00
53576--53628
26
2.0
26
92
0
88
28
22
22
26
1.99
51180--53747
896
2.8
893
82
5
3010
26
24
23
26
2.00
54370--54422
26
2.0
26
92
0
88
28
22
22
26
1.99
56858--56910
26
2.0
26
88
0
79
24
24
22
28
2.00

Tables:   1

The End!