Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167911.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_176, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57953

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420--2533
181
11.6
178
74
10
1443
41
10
8
40
1.69
2211--2254
22
2.0
22
100
0
88
36
9
9
45
1.68
2413--2696
140
2.0
138
81
6
320
36
11
6
45
1.66
4096--4388
158
1.9
157
80
7
351
42
8
8
40
1.66
4250--10836
181
36.5
181
75
8
4588
41
9
8
39
1.69
4250--30788
542
48.8
539
69
13
7809
41
10
8
40
1.69
7678--7713
16
2.1
17
90
10
56
41
5
8
44
1.58
9033--9074
17
2.5
17
88
3
59
57
2
2
38
1.25
9638--9677
15
2.6
16
81
18
57
35
7
5
52
1.51
10043--10091
25
1.9
26
95
4
91
36
8
4
51
1.51
10872--17394
181
36.5
179
73
10
3452
41
10
8
40
1.68
4891--14788
721
13.8
711
73
10
2710
41
9
8
40
1.68
15016--15287
133
2.0
135
84
2
352
38
9
7
44
1.67
17120--17683
286
2.0
286
81
5
667
37
9
8
43
1.68
17406--17888
181
2.7
176
80
7
503
39
8
9
43
1.67
18158--18395
117
2.0
117
99
0
467
44
11
6
37
1.67
18279--21570
181
18.4
182
74
12
1921
41
10
8
39
1.68
19036--21570
363
7.1
355
75
9
1585
41
10
7
40
1.68
18988--22742
181
21.1
176
72
11
1676
41
10
8
40
1.68
20990--21034
3
15.0
3
86
9
65
64
0
0
35
0.94
20818--21200
194
2.0
194
84
3
511
41
10
7
40
1.68
21100--21423
169
1.9
170
82
4
404
41
10
6
41
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21654--22704
528
2.0
531
80
5
1214
41
9
8
40
1.68
22234--22746
182
2.8
181
78
4
523
39
9
8
41
1.69
22614--22899
154
1.9
155
88
2
441
40
10
6
42
1.66
22786--23782
358
2.8
356
78
10
966
39
10
7
42
1.68
22786--23782
180
5.5
180
77
10
865
39
10
7
42
1.68
23672--23941
146
1.9
147
85
3
384
35
12
13
38
1.83
25778--25824
17
2.6
19
77
16
55
44
6
6
42
1.55
25956--26002
17
2.7
18
80
9
62
40
10
2
46
1.50
25999--26129
66
2.0
66
89
1
199
32
11
8
47
1.70
26072--30805
181
26.4
180
75
7
3107
40
10
8
40
1.70
28705--29025
171
1.9
171
83
3
423
41
10
8
39
1.71
30315--30364
17
2.8
19
67
14
52
40
6
10
44
1.63
26072--30800
361
13.2
360
75
7
3356
40
10
8
40
1.70
31397--32251
180
4.8
175
75
12
681
42
9
7
40
1.66
31441--32139
348
2.0
348
80
7
801
42
9
8
40
1.67
34314--35076
182
4.2
178
76
8
615
40
9
8
41
1.67
34883--34922
20
1.9
21
85
10
55
35
2
2
60
1.24
35106--35872
179
4.3
177
77
8
612
42
6
9
41
1.63
35136--35632
177
2.8
179
81
6
605
41
5
11
41
1.65
35136--35789
356
1.8
355
83
5
863
42
5
10
41
1.64
37148--37213
28
2.4
27
74
20
64
33
13
34
18
1.90
39135--39195
30
2.0
30
96
0
113
27
26
29
16
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43504--43533
9
3.2
9
95
4
51
63
0
0
36
0.95
43506--43535
10
3.1
10
95
4
53
63
0
0
36
0.95

Tables:   1

The End!