Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold146
Parameters: 2 7 7 80 10 50 1000
Length:  441899

Tables:   1   2   

This is table  2  of  2  ( 141 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
397601--397641
21
2.0
21
95
0
73
31
29
2
36
1.71
398359--398424
26
2.6
27
80
9
75
30
7
15
46
1.73
400402--400439
4
10.0
4
88
11
62
23
0
0
76
0.79
400447--400491
12
3.7
12
79
5
54
37
0
6
55
1.26
400441--400481
13
3.2
13
79
6
57
34
0
7
58
1.26
400441--400491
25
2.0
25
100
0
102
35
0
7
56
1.28
401223--401255
15
2.1
16
88
5
50
9
0
18
72
1.10
406499--406552
24
2.2
25
78
15
60
11
22
3
62
1.43
408764--408814
26
1.9
27
88
4
77
13
7
1
76
1.09
408766--408828
13
4.7
14
73
23
55
14
9
1
74
1.13
417113--417191
12
6.7
12
71
16
58
67
1
20
11
1.29
419728--419791
20
3.0
21
81
6
58
29
4
29
35
1.78
423980--424034
17
3.2
17
76
5
56
7
12
3
76
1.12
423985--424026
18
2.3
18
87
4
57
7
9
2
80
0.97
426143--426176
11
3.2
11
83
8
52
17
8
0
73
1.08
426145--426188
21
2.2
20
83
4
52
11
11
0
77
1.00
426480--426523
22
2.0
22
95
0
79
34
4
36
25
1.76
432608--432653
20
2.3
20
80
0
56
23
13
32
30
1.93
434325--434430
48
2.2
48
83
9
128
14
23
1
60
1.44
435473--435531
27
2.2
27
85
11
77
5
15
5
74
1.17
435523--435549
12
2.2
12
100
0
54
14
0
7
77
0.97

Tables:   1   2

The End!