Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold158
Parameters: 2 7 7 80 10 50 1000
Length:  399999

Tables:   1   2   

This is table  2  of  2  ( 141 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
267498--267668
92
1.9
92
90
2
272
21
22
28
28
1.99
278938--279012
35
2.1
35
97
0
141
33
22
13
30
1.92
280844--280883
18
2.2
18
86
8
55
62
0
7
30
1.23
283006--283083
36
2.1
37
88
2
113
25
29
19
25
1.98
283202--283627
47
9.1
47
95
0
701
28
29
9
32
1.88
285980--286036
30
1.9
30
85
0
78
42
10
12
35
1.77
293073--293298
114
2.0
114
91
0
371
32
16
21
28
1.96
303252--303303
26
2.0
26
92
0
86
42
11
11
34
1.77
316281--316309
12
2.3
13
94
5
51
51
0
0
48
1.00
317090--317172
28
2.9
28
80
8
87
34
19
4
40
1.73
325945--326043
37
2.7
37
95
0
171
25
32
18
24
1.97
326219--326453
48
4.9
48
95
0
425
30
27
6
35
1.83
331827--331902
22
3.3
22
69
16
64
26
30
9
34
1.87
331824--332205
47
8.1
47
95
0
674
24
28
11
35
1.90
335895--336118
40
5.7
40
81
7
224
25
28
20
25
1.99
336050--336127
40
1.9
41
82
10
97
26
28
20
24
1.99
348950--349126
40
4.6
37
80
12
169
27
28
20
23
1.99
357015--357060
14
3.3
13
87
9
56
69
0
2
28
1.00
384459--385095
130
4.9
130
76
6
513
38
12
17
31
1.87
384458--384999
260
2.1
260
80
6
598
39
13
16
30
1.87
389055--389177
51
2.4
52
89
5
178
34
16
23
25
1.95

Tables:   1   2

The End!